Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1374 ATGGATGATGAATTGCTTGAGTTGCAAAGGCAATTCGAGTTCGCACAGCAGGCAAAGTCGAATATTCGATTATCGGAGCGAAACGTTGTTGAATTGGTACAGAAATTGCAGGAGCTTCATATCATTGATTTCGACCTTCTTCACACTGTCTCTGGCAAAGAGTACATAACTCCCGAGCAACTGAGGAATGAGATGGTGGCTGAAATTAAGAAGCTAGGGCGTGTTTCTCTGATTGATCTCGCGGATGCTACTGGAGTCGATTTATACCATGTTGAGAAGCAGGCCCAACAAGTCATAAAAGATCATCCCGAGATGATGTTGGTTCAAGGGGAAATCATGTCAGAATCTTATTGGGATTCGATAGCTGAAGAAATTAATGAGAGGCTTCAGGAATGTGGTCAGATTGCGCTTACAGAACTTGCTGCACAATTAAATGTTGGTCTAGAATTGGTTGCCTCCATGTTGGAGACTCGTCTCGGAACGATGGTGAAGGGAAGGCTCGAAGGTGGGCAGTTGTATACTCCTGCATATGTAGCTCGTATTGGTGCCATGGTTCGAGGTGCTGCCAGAGGCATCACTGTTCCGACAAATTTGTCATTGTTATGGAGCTTGTTACAGCAATTACTGCAAGAAATGGATGGAACCAGCAGTGTGGTTGTTGAAGGAGCTTTCTTCCAGTCACTTTTTAACGGGCTTGTGAAGGAAAGTGAGATTCTAGGATCACTTCGTGCTGGAATACTTTGGACACCTGCGGTCTTTGCCATTGCTCAAAAGGAATCTGTGGATTCATTCTTTTCACAGAATTCTTTTATTAGCTATGACGTTCTACAGAAACTTGGAATTCCCCAGCCCGTTCAATTCTTGCAGTCCAGATATCCTGAAGGTATACCTCTAGATACAATTTTTGTCCACCCATCAATGATCGAAATGCTGGATTCTGCTACTGAGGATGCCCTTGAGCGTGGTAGCTGGAGTGATGCTCTTTCCTTATTGCCTTCATCCTTCACTCCTCAAGATGCATCTAAAATGTTGACCTTCTGCCAATCTGTTCAATCTGCTCTTAAGTCTAACAAAGCGCACATTTTTGGGGATTTTTATGTTTTGAGCAACAGCTTTATGAAGGGCATCTGTGAGCACTTGGTGAAAGAAATGGAAACATTAGGCGTTTCAGGGTCTTCTGGCATTAAAATGTTTGGGGATTCACAAGTAGCGAATGAAGCAAAAGTTGGGCAGGACTTCATTCGTTCAAATGAGTCAAATGAAACTACAACAGATGGCAGTGCCACTAAACATGTTGATAGAGGATCAAAGAAGAAAAGGGGAAAGGCTCCTGGGAATGCGGCAGCAAATGCGTCTGACAGTGCTGCAGATATTCTGGAACAGACTTCAACAAAATCTAAAAGAAGCCAGCGAAGGGGCAAGGATACATCTTTCTCACAAATTTCAGATTCAAAAATAGGTTCTAGGAAAGAATCACTTAAAACGAAGGAGGATAACCTCAGCAGTCCTTCAGATGAGTGGATTATGCAGAAGATTATGACTTTGGTTCCTGATTTTGAAGAACAATGCATGGATGATCCTGAAACAGTTCTGAGGCCTTTGGCTAATCATTTAAGGCCTACAATAATGGCTTCTTGGATGGAGAAGAAGAAAGCATTGTTTACCGAAAATGCAGAAAGAATGAAATCTTTGCTTGATAATTTGCAAAAGAAACTTGACGAGTCTTTCTTAAACATACAGCTTTATGAAAAAGCTTTAGAATTGTTTGAAGATGACCAATCAACCTCTGTTGTTTTGCACAGGCATTTATTGAGAACAGTAGCTTCCCCTATAGTGGATATGCTTCTTCGTAAGTTGGATGAGCACAACAAATTAAAGAGCGGGCTTGAAGTGGAGGAAACTTCAAATTCAGAACTACTCACGCTTAGTCCTGGAGACAGAGCTGCAATTGCGAAGAGTTTACCAGGAGGGCTTGGTAAAAAAGCTCTTAGTGTTGTTGAAGCATTGGAAGGAAAGCGGGTGGAAACATTTATGGGTGCTTTTAGAGAGGTAGCAGAAGAGAGTGGGTTGTCTTTGAAAAAGCTTGACAAGAAACTGGAAAGAACACTTTTACACTCATATCGTAAGGAATTGACATCTCAAATTTCTATCGAGACTGATCCAGTATCACTTCTGGCAAAAGTCGTGTCCTTACTTTATGTGCAGGTTTACCACAAAGCTCTTCAGGCCCCGGGACGGGCCATTTCTGTCGCCATCTCCCAACTGAAGGACAAGTTAGATGAGTCATCATTCAAGATTTTAACTGATTATCAGAGCGCCACAGTGACTCTTCTGGCATTATTAGCAGCTGCAACTGGGGATGAAGAGGATTGTTCATCTGATAGAATACTGAGCAAAAGGGAGCTTTTGGAGAGCCAAATGCCAGCTCTGAAATGCTTGGTCTTGAGCGCCTCGCAATCGTCAGAGCTTTCCGGAAAAGCTTAA 2484 0.4259 MDDELLELQRQFEFAQQAKSNIRLSERNVVELVQKLQELHIIDFDLLHTVSGKEYITPEQLRNEMVAEIKKLGRVSLIDLADATGVDLYHVEKQAQQVIKDHPEMMLVQGEIMSESYWDSIAEEINERLQECGQIALTELAAQLNVGLELVASMLETRLGTMVKGRLEGGQLYTPAYVARIGAMVRGAARGITVPTNLSLLWSLLQQLLQEMDGTSSVVVEGAFFQSLFNGLVKESEILGSLRAGILWTPAVFAIAQKESVDSFFSQNSFISYDVLQKLGIPQPVQFLQSRYPEGIPLDTIFVHPSMIEMLDSATEDALERGSWSDALSLLPSSFTPQDASKMLTFCQSVQSALKSNKAHIFGDFYVLSNSFMKGICEHLVKEMETLGVSGSSGIKMFGDSQVANEAKVGQDFIRSNESNETTTDGSATKHVDRGSKKKRGKAPGNAAANASDSAADILEQTSTKSKRSQRRGKDTSFSQISDSKIGSRKESLKTKEDNLSSPSDEWIMQKIMTLVPDFEEQCMDDPETVLRPLANHLRPTIMASWMEKKKALFTENAERMKSLLDNLQKKLDESFLNIQLYEKALELFEDDQSTSVVLHRHLLRTVASPIVDMLLRKLDEHNKLKSGLEVEETSNSELLTLSPGDRAAIAKSLPGGLGKKALSVVEALEGKRVETFMGAFREVAEESGLSLKKLDKKLERTLLHSYRKELTSQISIETDPVSLLAKVVSLLYVQVYHKALQAPGRAISVAISQLKDKLDESSFKILTDYQSATVTLLALLAAATGDEEDCSSDRILSKRELLESQMPALKCLVLSASQSSELSGKA 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1374 827 PANTHER E3 UFM1-PROTEIN LIGASE 1 2 820 IPR018611 GO:0061666|GO:0071569
Lele31g1374 827 MobiDBLite consensus disorder prediction 487 501 - -
Lele31g1374 827 Pfam E3 UFM1-protein ligase 1 4 288 IPR018611 GO:0061666|GO:0071569
Lele31g1374 827 MobiDBLite consensus disorder prediction 412 426 - -
Lele31g1374 827 Coils Coil 15 35 - -
Lele31g1374 827 MobiDBLite consensus disorder prediction 412 504 - -
Lele31g1374 827 Coils Coil 551 585 - -
Lele31g1374 827 Coils Coil 612 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1374 Lele-ChrLele31 19559545 19565453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1374 1 787 EF-hand Containing Proteins AT3G46220 63.024 0.0 976
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0180 29 1011532 1017412 Lele31g1374 31 19559545 19565453 hybridization
Lele30g1227 30 14995028 15000955 Lele31g1374 31 19559545 19565453 hybridization