Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1041 ATGGATCCTCGTTCGGATTCGGATCCTTTGACTATGTCCTATGCCATGGCCAGACTTACTGTTTCTGTTCTTAATTTGATCACGGAAAAGTCCACTGGATTGGTAATCATGTCAACCATGTCAACTGTGAAGTTTTCCCCACATTGCGAGCTCCGAGTTTCATGCCAAAACCAACTCAACAGCGCCATAGTTAAGTGCCCATCCTCAGTTGGATTTGTGAGGAGTGTTCTCGCAACATTTGGCTCGAAGTCATCGCTCTCGTTTAGGACAATTACCATGGCTACATACAAGATTAAGTTGGTTGATCCTCATGGACAAGAGAACGAGTTTGAGGCCCCTGATGATACCTACGTCCTAGATGCAGCAGAGAATGCTGGAGTTGAGCTCCCTTATTCGTGCCGAGCTGGAGCATGCTCTACCTGTGCTGGGCAGATAGTATCTGGTGCTGTGGATCAGTCGGATGGCTCTTTCCTTGATGACAATCAGATGAAGGATGGTTATCTTCTAACTTGCGTCTCCTACCCAACTTCGGATTGTGTAATTCATACTCACAAGGAAACTGATCTCTATTGA 573 0.4607 MDPRSDSDPLTMSYAMARLTVSVLNLITEKSTGLVIMSTMSTVKFSPHCELRVSCQNQLNSAIVKCPSSVGFVRSVLATFGSKSSLSFRTITMATYKIKLVDPHGQENEFEAPDDTYVLDAAENAGVELPYSCRAGACSTCAGQIVSGAVDQSDGSFLDDNQMKDGYLLTCVSYPTSDCVIHTHKETDLY 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1041 190 CDD fer2 101 182 IPR001041 GO:0051536
Lele30g1041 190 PANTHER FERREDOXIN 40 190 - -
Lele30g1041 190 Gene3D - 93 190 IPR012675 -
Lele30g1041 190 SUPERFAMILY 2Fe-2S ferredoxin-like 93 188 IPR036010 GO:0051536
Lele30g1041 190 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 133 141 IPR006058 GO:0051537
Lele30g1041 190 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 94 190 IPR010241 GO:0009055|GO:0022900|GO:0051537
Lele30g1041 190 FunFam Ferredoxin 94 190 - -
Lele30g1041 190 Pfam 2Fe-2S iron-sulfur cluster binding domain 103 176 IPR001041 GO:0051536
Lele30g1041 190 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 96 187 IPR001041 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1041 Lele-ChrLele30 13751269 13753846 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1041 30 13751269 13753846 Lele31g1179 31 18265662 18266117 hybridization
Lele30g1041 30 13751269 13753846 Lele32g0349 32 2185356 2187964 hybridization