Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0349 ATGGGCGATTTGGCGGATCTTGCAACTTGCATCGGATGGAAATGGATCCTCGTTTGGAACTCGGATCCTCGTTTGGAACTCGGATCCTTTGACTATGTCCTCTACCTAATCTCGGTCACATGCCAAAACCCTCTCCCTATTAACAAAATAAATGAACCAAGGGTTCCGTTCTTCTCACTGCTTGCACTTCATTCTCTGTTGTCGTCATTCCTCCTCGTTCTCTCCGCTCTTGCCTCCCGTCACTTCTCGCGCCCTCTCTTGCCACAGACAGAATTACTGCTTATGTGGGTAATCATGTCAACCATGTCAACTGTGAAGTTTTCCCCAAATTGCGAGCTCCGAGTTTCATGCCAAAACCAACTCAACAGCGCCATAGTTAAGTGCCCATCCTCAGTTGGATTTGTGAGGAGTGTTCCCACAACATTTGGCTTGAAGTCACCGCTCTCGTTTAGAACAATTACCATGGCTACATACAAGATTAAGTTGGTTGGTCCTCATGGAGAAGAGAACGAGTTTGAGGCCCCTGATGATACCTACATCCTAGATGCAGCAGAGAATGCTGGAGTTGAGCTCCCTTATTCGTGCCGAGCTGGAGCATGCTCTACCTGTGCTGGGCAGATAGTATCTGGTGCTGTGGATCAGTCGGATGGCTCATTCCTTGATGACAATCAAATGAAGGATGGTTATCTTCTAACTTGTGTCTCCTACCCAACTTCGGATTGTGTAATTCATACTCACAAGGAAACTGATCTCTATTGA 759 0.469 MGDLADLATCIGWKWILVWNSDPRLELGSFDYVLYLISVTCQNPLPINKINEPRVPFFSLLALHSLLSSFLLVLSALASRHFSRPLLPQTELLLMWVIMSTMSTVKFSPNCELRVSCQNQLNSAIVKCPSSVGFVRSVPTTFGLKSPLSFRTITMATYKIKLVGPHGEENEFEAPDDTYILDAAENAGVELPYSCRAGACSTCAGQIVSGAVDQSDGSFLDDNQMKDGYLLTCVSYPTSDCVIHTHKETDLY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0349 252 SUPERFAMILY 2Fe-2S ferredoxin-like 155 250 IPR036010 GO:0051536
Lele32g0349 252 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 156 252 IPR010241 GO:0009055|GO:0022900|GO:0051537
Lele32g0349 252 CDD fer2 165 244 IPR001041 GO:0051536
Lele32g0349 252 Pfam 2Fe-2S iron-sulfur cluster binding domain 166 238 IPR001041 GO:0051536
Lele32g0349 252 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 195 203 IPR006058 GO:0051537
Lele32g0349 252 Gene3D - 155 252 IPR012675 -
Lele32g0349 252 FunFam Ferredoxin 156 252 - -
Lele32g0349 252 PANTHER FERREDOXIN 130 252 - -
Lele32g0349 252 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 158 249 IPR001041 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0349 Lele-ChrLele32 2185356 2187964 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0360 29 2222410 2222865 Lele32g0349 32 2185356 2187964 hybridization
Lele30g1041 30 13751269 13753846 Lele32g0349 32 2185356 2187964 hybridization