Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1179 ATGTCAACCGTGAAGTTTCCCCCAAATTGCGAGCTCCGAGTTTCATGCCAAAACCAACCCACTAGTGCCATAGTTAAGTGCCCATCCTCAGTTGGATTTGTGAGGTGTGTTCCCACAACATTTGGCTTAAAGTCATCGCTCTCGTTTAGGACAACTACCATGGCTACGTACAAGATTAAGTTGGTTGGTCCTGATAGACAAGAGAATGAGTTTGAGGCCTCTGATGATACCTACATCCTAGATGCAGCAGAGAATGCTGGAGTTGAGCTCCCTTATTCATGCCGAGCTGGAGCATGCTCTACCTGTGCTGGGCAGATAGTATCTGGTACCGTGGATCAGTCGGATGGCTCATTCCTTGATGACAATCAAATGAAGGATGGCTATCTTCTAACTTGTGTCTCCTACCCAACTTCGGATTGTGTAATTCGTACTCACAAGGAAAGTGATCTCTATTGA 456 0.4605 MSTVKFPPNCELRVSCQNQPTSAIVKCPSSVGFVRCVPTTFGLKSSLSFRTTTMATYKIKLVGPDRQENEFEASDDTYILDAAENAGVELPYSCRAGACSTCAGQIVSGTVDQSDGSFLDDNQMKDGYLLTCVSYPTSDCVIRTHKESDLY 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1179 151 FunFam Ferredoxin 55 151 - -
Lele31g1179 151 PANTHER FERREDOXIN 40 151 - -
Lele31g1179 151 SUPERFAMILY 2Fe-2S ferredoxin-like 50 148 IPR036010 GO:0051536
Lele31g1179 151 CDD fer2 64 143 IPR001041 GO:0051536
Lele31g1179 151 Gene3D - 54 151 IPR012675 -
Lele31g1179 151 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 94 102 IPR006058 GO:0051537
Lele31g1179 151 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 55 151 IPR010241 GO:0009055|GO:0022900|GO:0051537
Lele31g1179 151 Pfam 2Fe-2S iron-sulfur cluster binding domain 65 137 IPR001041 GO:0051536
Lele31g1179 151 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 57 148 IPR001041 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1179 Lele-ChrLele31 18265662 18266117 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0360 29 2222410 2222865 Lele31g1179 31 18265662 18266117 hybridization
Lele30g1041 30 13751269 13753846 Lele31g1179 31 18265662 18266117 hybridization