Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0173 ATGGCAGGATTAACCTCTTCTCTGGCAGGTGATTGGAGTGAGAACAAGTTGTATAAAGGAATATTTGCGGTGTCGGGAATCATGGTCACACTCGTCACCTATGGTGTTTTGCAGGAAAAGATCATGAGAGTTCCTTATGGGGTAGATAAGGAGTACTTCAAATACTCACTGTTTCTTGTTTTCTGCAACCGTCTCACAACAACTGCTGTTTCTGCTGGTTCCTTACTGGCAAGTAAGAAAACATTAACTCCAGCAGCTCCTATTTACAAGTATTGTGTTGTGTCAGTAACAAACATTCTGACCACAACTTGTCAGTATGAGGCCCTTAAATATGTCAGTTTCCCTGTTCAGACTCTTGCAAAGTGTGCTAAAATGATCCCAGTTATGATCTGGGGCACTATCATAATGCAGAAGAGATACGTGGGACATGACTATTTCTTGGCGTTTTTAGTGACCCTGGGATGCTCAATATTTATCCTATATCCTGCAGGACCTGACATAAGTCCGTATAGTAGAGGAAGGGAAAATACTGCTTGGGGCGCTTTCCTAATGATTGGTTATCTTGGGTTTGATGGGTTTACAAGTACATTCCAAGATAAGCTGTTTAAAGGTTATGACATGGAGATACATAACCAGATATTCTATGTTACGTTCTGTTCTTGTGTTCTTAGCCTGACAGGCCTTATCTTACAAGGACATTTAGTCCCAGCAGTCGAGTTTGTTTATCGCCATAATGGTTGTTTCTTTGATGTAGCATTGCTTTCAACAGTTGCCACGCTTAGTCAATTTTTTATTTCCTACACAATTCGCACTTTTGGTGCTCTAACATTTGCTACTATAATGACTACAAGACAGTTGGTAAGCATTATGCTATCATGTGCGTGGTTTGCCCATCCTCTTAGCTTGGAACAGTGGTTTGGAGCTGTCATTGTCTTTGGCTCTCTCTACGCTAAAAGCTTCCTGAGGAAAGCACCCCAAAAGACCCCATCTTCAGAAACTGTACAAAGCGAGGGTTCTAATGTAAAGTCAATTCCATGA 1038 0.4133 MAGLTSSLAGDWSENKLYKGIFAVSGIMVTLVTYGVLQEKIMRVPYGVDKEYFKYSLFLVFCNRLTTTAVSAGSLLASKKTLTPAAPIYKYCVVSVTNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTIIMQKRYVGHDYFLAFLVTLGCSIFILYPAGPDISPYSRGRENTAWGAFLMIGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYVTFCSCVLSLTGLILQGHLVPAVEFVYRHNGCFFDVALLSTVATLSQFFISYTIRTFGALTFATIMTTRQLVSIMLSCAWFAHPLSLEQWFGAVIVFGSLYAKSFLRKAPQKTPSSETVQSEGSNVKSIP 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0173 345 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 16 323 IPR013657 GO:0055085
Lele29g0173 345 Pfam UAA transporter family 20 319 IPR013657 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0173 Lele-ChrLele29 946961 951333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0173 10 336 Organic Solute Cotransporters AT5G59740 77.015 0.0 537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1224 11 19330330 19332742 Lele29g0173 29 946961 951333 CCT
Lele12g0097 12 819470 821855 Lele29g0173 29 946961 951333 CCT
Lele29g0173 29 946961 951333 Lele31g1380 31 19612792 19617122 hybridization