Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0157 ATGATTGCGTTCAACTTTCCTGATTCTTCAAATGTGCATCTCTTCCTCTATATAAATGGTTATCTTGTTAAAGAGTCTTCAAATCTGAAGGGGAATTTAGGGTTTTGGTTTGGTCTGGTACTCCCTGAAGCTGGCGATCAGGAAATTTCAAGGATTCCAACAATGGCAGCCAATTCTGCCAATGGGGATCACCAAACATCAACGAAGGCACCACCCTTGCCATCTCCCTTGCGTTTTTCCAAATTCTTTCAGTCCAATATGAGAATTTTGGTTACTGGAGGAGCTGGATTTATTGGCTCTCACCTAGTGGACAGATTGATGGAAAATGAAAAAAATGAGGTAATAGTTGTTGATAACTACTTCACTGGATCCAAAGACAATCTCAGAAAATGGATTGGCCACCCAAGATTCGAGCTCAAGCGTCATGATGTCACAGAGCCTTTGTTGGTTGAAGTTGATCAGATTTACCATCTTGCATGTCCCGCTTCTCCTATCTTCTACAAATACAATCCTGTGAAGACAATAAAGACAAATGTGATTGGTACACTGAACATGCTAGGGCTTGCAAAACGAGTTGGTGCAAGGATTTTGCTTACATCAACATCAGAAGTATATGGAGACCCTCTTGTGCATCCACAACCTGAAAGCTATTGGGGCAATGTTAATCCCATAGGGGTTCGGAGCTGTTATGATGAGGGCAAGCGTGTGGCTGAAACTTTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGTGTTGCAAGAATCTTTAACACATATGGACCACGCATGAATATTGATGACGGGCGTGTTGTCAGCAACTTCATTGCACAAGCAATTCGGGGTGAACCATTGACCGTCCAATCTCCAGGAACTCAAACTCGCAGTTTCTGTTATGTCTCTGACCTGGTCGACGGCCTTATCCGTCTCATGGAAGGGGAACACACTGGTCCGATCAATCTTGGAAACCCAGGTGAATTTACAATGATCGAACTCGCTGAGACAGTGAAGGAGCTTATCAATCCAAACGTTGAGATAAAGACGGTAGAGAACACTCCCGATGACCCTCGACAGAGAAAACCTGATATAACGAAGGCAAAGGAATTACTTGGTTGGGAACCTAAGGTCAAGTTGCGGGATGGCCTTCCTCATATGGAAGAAGATTTCCGTCTCAGGCTTGGAGTTGATAAGAACTAA 1200 0.4342 MIAFNFPDSSNVHLFLYINGYLVKESSNLKGNLGFWFGLVLPEAGDQEISRIPTMAANSANGDHQTSTKAPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELKRHDVTEPLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQSPGTQTRSFCYVSDLVDGLIRLMEGEHTGPINLGNPGEFTMIELAETVKELINPNVEIKTVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPHMEEDFRLRLGVDKN 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0157 399 FunFam UDP-glucuronic acid decarboxylase 6 86 395 - -
Lele29g0157 399 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 69 395 IPR044516 GO:0042732|GO:0048040|GO:0070403
Lele29g0157 399 Gene3D - 84 214 - -
Lele29g0157 399 Gene3D - 215 394 - -
Lele29g0157 399 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 82 391 IPR036291 -
Lele29g0157 399 CDD UGD_SDR_e 87 391 - -
Lele29g0157 399 Pfam GDP-mannose 4,6 dehydratase 90 386 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0157 Lele-ChrLele29 870070 874768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0157 84 383 Miscellaneous Gene Families AT1G02000 23.881 5.89e-16 77.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0157 29 870070 874768 Lele31g1396 31 19700259 19703857 hybridization
Lele29g0157 29 870070 874768 Lele32g0146 32 833248 840416 hybridization