Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0146 ATGGAAGAGGGGTTCGCTGGAGATGGAGGCGTGAAGGGAGGAATGGGTGACGACTGGATAGGAATGGGTGCATTGATGAAGGATGATGATGGTGACGACAGCGTGGAGGAAACAGCTTCTATATGCTATATACCTGTCCTTAAGCGTGTTATCGCTTCTCAATCTGCCATTCTCCAGATCTCAATCCTCGGTACTGTTTCTCCTCAAAATATCTTTTCCAAAACCCTGTACACATCGTCGGCATCCAATCCTATAGCTGTTCTTCATTATCCCCGAGCTATTATTGATTCTGCTTCTAGTTGGTTTTTTGGGCCAGAAGCTCCGCAGCTAATCAGGTCTATCACCGGCTCTCTCTTTCTCTTAGTCCTTTTGTCGCCGAAGTTGCTCTTCACTGTCCCTGTCCCTGAGCCATTGACTCTGCGTCTAATTGTTTTAAGTCACTTGACTGACTTAGTTTTGGACAATGGCAGCGAACTCTTCAAATGGAGACCAGCAAAATGCAACAAAGTCACCTCCCCTGCCATCCCCCTTTCGTTTTTCAAAGTTCTTTCAGATGTATGCATTTGTGCACATGATATCATATTCCATCTGGTAATTGAAAAGTTGACTGCGATTGTCAGAAAGGTAATTGTCGTTGATAACTTCTTCACTGGATCAAAGGACAACCTTAAAAAATGGATTGGTCATCCAAGATTTGAGCTAATCCGTCATGATGTGACAGAGCAATTACTGATTGAGGTTGATCAGATCTACCATCTTGCCTGCCCTGCTTCTCCAATTTTCTACAAATACAATCCTGTGAAGACAATAAAGACAAATGTTATCGGAACATTGAATATGCTTGGCCTTGCAAAGCGAGTGGGAGCACGTATTTTGCTTACCTCTACTTCAGAAGTATATGGGGATCCTCTTGTGCACCCACAACCAGAAAGCTATTGGGGTAATGTTAACCCTATTGGAGTTCGGAGTTGCTATGATGAGGGGAAGCGTGTTGCAGAAACTTTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGCATTGCTAGAATCTTCAACACATATGGGCCACGCATGAATATTGATGATGGGCGTGTTGTCAGCAACTTTATTGCTCAAGCACTTCGTGGAGAACCATTGACGGTCCAATATCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGATATGGTTGATGGTCTCATCCGTCTCATGGAAGGGCAAGACACTGGCCCAACCAACCTTGGTAACCCAGGTGAATTTACAATGATTGAGCTTGCTGAGACGGTGAAAGATCCAGCAGTGGAAATAAAGATGGTGGAGAACACTCCTGATGACCCTCGACAGAGAAAACCAGACATAACAAAAGCAAAAGAAGTGTTGGGTTGGGAACCAAAGGTCAAGTTGCGAGATGGCCTTCCTCTCATGGAAGAAGATTTCCGTCTCAGGCTCGGGGTTGAGAAAAAGAATTGA 1479 0.4429 MEEGFAGDGGVKGGMGDDWIGMGALMKDDDGDDSVEETASICYIPVLKRVIASQSAILQISILGTVSPQNIFSKTLYTSSASNPIAVLHYPRAIIDSASSWFFGPEAPQLIRSITGSLFLLVLLSPKLLFTVPVPEPLTLRLIVLSHLTDLVLDNGSELFKWRPAKCNKVTSPAIPLSFFKVLSDVCICAHDIIFHLVIEKLTAIVRKVIVVDNFFTGSKDNLKKWIGHPRFELIRHDVTEQLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQYPGTQTRSFCYVSDMVDGLIRLMEGQDTGPTNLGNPGEFTMIELAETVKDPAVEIKMVENTPDDPRQRKPDITKAKEVLGWEPKVKLRDGLPLMEEDFRLRLGVEKKN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0146 492 Pfam GDP-mannose 4,6 dehydratase 212 476 IPR016040 -
Lele32g0146 492 CDD UGD_SDR_e 196 483 - -
Lele32g0146 492 FunFam UDP-glucuronic acid decarboxylase 6 186 487 - -
Lele32g0146 492 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 207 483 IPR036291 -
Lele32g0146 492 Gene3D - 193 485 - -
Lele32g0146 492 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 196 487 IPR044516 GO:0042732|GO:0048040|GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0146 Lele-ChrLele32 833248 840416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0146 244 475 Miscellaneous Gene Families AT4G00110 24.609 2.44e-11 63.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0157 29 870070 874768 Lele32g0146 32 833248 840416 hybridization
Lele30g1253 30 15144882 15148079 Lele32g0146 32 833248 840416 hybridization