Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1396 ATGGCAGCGAACTCTACAAACGGAGACCAACAAAAAGCAACAAAATCACCTCCCCTGCCATCCCCGTTGCGTTTTTCAAAGTTCTTTCAGTCCAACATGAGAATCCTGGTCACTGGAGGAGCTGGATTTATTGGCTCTCACCTAGTCGATAGATTGATGGAAAATGAAAAAAATGAGGTAATTGTCGTTGATAACTTCTTCACTGGATCAAAGGACAACCTTAGAAAATGGATTGGTCATCCAAGATTTGAGTTAATCCGTCATGATGTGACAGAGCAATTATTGATTGAGGTTGATCAGATCTACCATCTTGCCTGCCCCGCTTCTCCAATTTTCTACAAATACAATCCTGTGAAGACAATAAAGACAAATGTTATTGGAACATTGAACATGCTTGGCCTTGCAAAGCGAGTGGGAGCACGTATTTTGCTTACCTCTACTTCAGAAGTTTATGGGGATCCTCTTGTACATCCACAACCGGAAAGCTATTGGGGTAATGTTAACCCTATTGGAGTTCGGAGTTGTTATGATGAAGGGAAGCGTGTTGCAGAAACTTTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGCATTGCTAGAATCTTTAATACATATGGGCCACGCATGAATATTGATGATGGGCGGGTTGTCAGCAACTTTATTGCCCAAGCACTTCGTGGAGAACCATTGACTGTCCAACATCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGATATGGTTGATGGTCTCATCCGTCTCATGGAAGGGGAAGACACTGGTCCAATCAACCTTGGAAACCCAGGTGAATTTACAATGATTGAGCTTGCTGAGACGGTGAAAGAGCTTATTAATCCAGCGGTGGAAATAAAAATGGTGGAGAACACTCCTGATGACCCTCGTCAGAGAAAACCAGACATAACAAAAGCAAAAGAAGTGTTAGGTTGGGAACCAAAGGTCAAGTTGCGAGATGGCCTTCCTTTCATGGAAGAAGATTTCCGTCTCAGGCTTGAGGTTGAAAAGAAGAATTGA 1041 0.4265 MAANSTNGDQQKATKSPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVVDNFFTGSKDNLRKWIGHPRFELIRHDVTEQLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQHPGTQTRSFCYVSDMVDGLIRLMEGEDTGPINLGNPGEFTMIELAETVKELINPAVEIKMVENTPDDPRQRKPDITKAKEVLGWEPKVKLRDGLPFMEEDFRLRLEVEKKN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1396 346 MobiDBLite consensus disorder prediction 1 17 - -
Lele31g1396 346 Pfam GDP-mannose 4,6 dehydratase 36 329 IPR016040 -
Lele31g1396 346 Gene3D - 32 343 - -
Lele31g1396 346 MobiDBLite consensus disorder prediction 1 21 - -
Lele31g1396 346 CDD UGD_SDR_e 33 337 - -
Lele31g1396 346 FunFam UDP-glucuronic acid decarboxylase 6 32 341 - -
Lele31g1396 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 28 337 IPR036291 -
Lele31g1396 346 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 18 342 IPR044516 GO:0042732|GO:0048040|GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1396 Lele-ChrLele31 19700259 19703857 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1396 30 329 Miscellaneous Gene Families AT1G02000 23.881 2.52e-17 80.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0157 29 870070 874768 Lele31g1396 31 19700259 19703857 hybridization
Lele30g1253 30 15144882 15148079 Lele31g1396 31 19700259 19703857 hybridization