Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1741 ATGGTGGCTGCTTTATCTATTGTGGGTTCATCAGCATTGGACTCGTATACGGGTCCATGTTTGTGCGTCGATGCGTTGCCTACGACTAGTATGAATCTCAAAAGTGGAGGAGACGTTGTTTTGTGGAAGAAGCATTCGATAAAGCGAGGAGCGATGCAATTGAGTAGTTCCTTTATTGATGCTGGGCGAGAGTGGCGGCTCTGTGTTAATAGAAATTCCAGGAAGCAGCGCAGTAATAGAAGACTAAAAATTGTTAACGACCTTGGTGGACAATATGAAGATACGTTTGGTGATGTTAAAATGCAATTACTCAACTATTTCACGTATAAGGCTGCAAGGACTGTTCTTCAGCAGTTGTATGAGATGAACCCCACCCAATATAGGTGGTTCTACGAGTTTGTTGCAACAAACAAGCCAGGAGATGGGAAACGTTTTATCAGATCCCTTGGCAAGGAGAAACAAGACCTTGCTGAGAGAGTGATGTTAACAAGGCTTCACCTTTATGGTAAATGGGTTAAGAAATGTAATCATGCTGAGATATATCAAGAAATCTCAGATGAAAACTTGGAGCTGATGAGGGAAAGGCTGATGGAGACCATAATATGGCCCTCAGATGACACAAACACGGAGAAAATCGGCTGA 642 0.4283 MVAALSIVGSSALDSYTGPCLCVDALPTTSMNLKSGGDVVLWKKHSIKRGAMQLSSSFIDAGREWRLCVNRNSRKQRSNRRLKIVNDLGGQYEDTFGDVKMQLLNYFTYKAARTVLQQLYEMNPTQYRWFYEFVATNKPGDGKRFIRSLGKEKQDLAERVMLTRLHLYGKWVKKCNHAEIYQEISDENLELMRERLMETIIWPSDDTNTEKIG 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1741 213 PANTHER CHAPERONIN-LIKE RBCX PROTEIN 1, CHLOROPLASTIC 53 204 IPR003435 GO:0044183|GO:0110102
Lele28g1741 213 Pfam RbcX protein 101 199 IPR003435 GO:0044183|GO:0110102
Lele28g1741 213 Gene3D - 85 210 IPR038052 -
Lele28g1741 213 SUPERFAMILY RbcX-like 91 210 IPR038052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1741 Lele-ChrLele28 20306857 20309723 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1547 02 19505152 19505832 Lele28g1741 28 20306857 20309723 CCT
Lele03g1292 03 7753181 7753870 Lele28g1741 28 20306857 20309723 CCT
Lele04g1537 04 20359246 20359926 Lele28g1741 28 20306857 20309723 CCT
Lele25g1727 25 24946092 24948452 Lele28g1741 28 20306857 20309723 hybridization
Lele26g1733 26 20874516 20877218 Lele28g1741 28 20306857 20309723 hybridization