Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1733 ATGGTGGCTGCTTTATCTATTGTGGCTTCATCAGCATTGGACTCGCACACGGGTCCATGTTTGTGCGTCGATGCGTTGCCTACGAATAGTATGAATCTCAAAAGTGGAGGAGACATTATTTTGTGGAAGAAGCATTCGATAAAGCGAGGAGCGATGCAATTGAGTAGTTCCTTCATTGATGCTGGGCGAGAGTGGCGGCTCTGTGTTAATAGAAATCCCAGGAAGCAGCGCAGTAATAGAAGACTAAAAATTGTTAACGACCTTGGTGGGCAGTATGAAGATACGTTTGGTGATGTTAAAACGCAATTACTCAACTATTTCACGTACAAGGCTGCCAGGACTGTTCTTCGGCAGTTGTATGAGATGAACCCCACCCAATATAGGTGGTTCTATGAGTTTGTTGCAACAAACAAACCAGGAGATGGGAAACGTTTTATCAGATCCCTTGGCAAGGAGAAACAAGACCTTGCTGAGAGAGTGATGATAACAAGGCTTCACCTTTATGGTAAATGGGTTAAGAAATGTAATCATGCTGAGATATATCAAGAAATCTCAGATGAAAACTTGGAGCTGATGAGGGAAAGGCTGATGGAGACCATAATATGGCCCTCAGATGACACAAACACAGAGAAAATCGGCTGA 642 0.4346 MVAALSIVASSALDSHTGPCLCVDALPTNSMNLKSGGDIILWKKHSIKRGAMQLSSSFIDAGREWRLCVNRNPRKQRSNRRLKIVNDLGGQYEDTFGDVKTQLLNYFTYKAARTVLRQLYEMNPTQYRWFYEFVATNKPGDGKRFIRSLGKEKQDLAERVMITRLHLYGKWVKKCNHAEIYQEISDENLELMRERLMETIIWPSDDTNTEKIG 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1733 213 Pfam RbcX protein 101 199 IPR003435 GO:0044183|GO:0110102
Lele26g1733 213 Gene3D - 85 210 IPR038052 -
Lele26g1733 213 PANTHER CHAPERONIN-LIKE RBCX PROTEIN 1, CHLOROPLASTIC 53 204 IPR003435 GO:0044183|GO:0110102
Lele26g1733 213 SUPERFAMILY RbcX-like 91 210 IPR038052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1733 Lele-ChrLele26 20874516 20877218 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1547 02 19505152 19505832 Lele26g1733 26 20874516 20877218 CCT
Lele03g1292 03 7753181 7753870 Lele26g1733 26 20874516 20877218 CCT
Lele04g1537 04 20359246 20359926 Lele26g1733 26 20874516 20877218 CCT
Lele26g1733 26 20874516 20877218 Lele28g1741 28 20306857 20309723 hybridization