Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1525 ATGGAGGTGAATGGAGAGGAAGCTACCATGCGGAATGTAGAAGATTCCATTGGTGTTCTTGATGTCTTCATACATCAAGCTAGGGACATTCATAACATTTGCATATATCACAAGCAAGATGTTTATGCTAAGATTTGCTTAACTAGCAATCCTGATGACACTCTGTCTACCAAGATCATTAATGGAGGTGGAAGGAACCCTGTGTTCAATGAGAATCTTCGGTTAAATATTAAAACTGTTGATTCCTCTCTCAAATGTGAGATATGGATGCTTAGCAGGGTCAAGAATTATCTAGAAGATCAGCTTCTTGGTTTTGCATTGGTTCCTTTGTCTGAAGTTCTTGTCAAGAATGGAAGAACACTTGAGAAAGAGTTCTCTCTTTCTTCAACTGATCTGTTCCATTCCCCGGCCGGCTTTGTCCTATTGTCCCTCGCATATGCCGGAGCTTCCCCTGATGTCATGGTGATCCCTCCTTCCTCGGTCTCCACCGAGGCCGCTGCAGCCGCCGCCGATGCCGTGGCTCTGGACCCTGAGACCACCGAGTCTCTGGCCAAAGATTTAGATAAAATCGAGTTCCCAGATCCGAAGATTGTGAATGAAGATCACTTAATGGTTTCAGAATACTTTGGGATTTCTTGTGATGAGACCCAATGTTCTGAAAGTCTGGCCACTTCTGATGCTGATCATCATAGCTCTGATGCAGGTGTTCAACTTGTAGAAAGCTTCTCAGCATGCAGTGTTGAGTCTGCTCAACCTTCCATCAACAAGGTTGATTCACCACCAAGCATTGTATCAACAAATGGGGTTTCTTCCCCATCAGTGCAAGCTAGCTCAGACTCATCTGATGCTGCTGCTCCTCCAGCTGCATCGAAATCCCCCACTCGGGAACAAGTTTCCGGCGCCAAACAAGAGAAATGTGTGGCGGCATCGGCATCGGAGGATGTTAAAGATGGAGTGGGTGAGAGTGATTCCTCAAGCAAAGTGGTTCCAAACAAAGAAGGTGAATCATCATTCCCTAAGCCTGTTGTGTCTGTGAACATTGAGCCAGAACCAATGGTGGTTCAGCAGGATATAGTAGACATGTACATGAAAAGCATGCAGCAGTTCACCGAGTCGTTGGCGAAGATGAAGCTTCCGGATATCGATATCGGGTCGCCGACTCCAAGCTCAGGGAACTCGAGCTCAGACAAGAAATTGGAATCGCCAGCATCATCAAAGAGCAACAATAATAACTCTCGTGTGTTTTATGGAAGCAGAGCTTTCTTCTGA 1269 0.4586 MEVNGEEATMRNVEDSIGVLDVFIHQARDIHNICIYHKQDVYAKICLTSNPDDTLSTKIINGGGRNPVFNENLRLNIKTVDSSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVKNGRTLEKEFSLSSTDLFHSPAGFVLLSLAYAGASPDVMVIPPSSVSTEAAAAAADAVALDPETTESLAKDLDKIEFPDPKIVNEDHLMVSEYFGISCDETQCSESLATSDADHHSSDAGVQLVESFSACSVESAQPSINKVDSPPSIVSTNGVSSPSVQASSDSSDAAAPPAASKSPTREQVSGAKQEKCVAASASEDVKDGVGESDSSSKVVPNKEGESSFPKPVVSVNIEPEPMVVQQDIVDMYMKSMQQFTESLAKMKLPDIDIGSPTPSSGNSSSDKKLESPASSKSNNNNSRVFYGSRAFF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1525 422 SMART C2_3c 19 122 IPR000008 -
Lele28g1525 422 MobiDBLite consensus disorder prediction 377 422 - -
Lele28g1525 422 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 18 149 IPR035892 -
Lele28g1525 422 ProSiteProfiles C2 domain profile. 1 125 IPR000008 -
Lele28g1525 422 MobiDBLite consensus disorder prediction 252 342 - -
Lele28g1525 422 MobiDBLite consensus disorder prediction 385 416 - -
Lele28g1525 422 PANTHER EXPRESSED PROTEIN 10 422 - -
Lele28g1525 422 MobiDBLite consensus disorder prediction 252 299 - -
Lele28g1525 422 Pfam C2 domain 18 125 IPR000008 -
Lele28g1525 422 Gene3D C2 domain 13 165 IPR035892 -
Lele28g1525 422 CDD C2 20 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1525 Lele-ChrLele28 12096893 12098161 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1515 25 11757055 11758368 Lele28g1525 28 12096893 12098161 hybridization
Lele26g1536 26 11588648 11589997 Lele28g1525 28 12096893 12098161 hybridization