Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1515 ATGGACTCTCCTCAATCTGTTGTGTCGCCGTTCAAGAACTCTCTGTTGGGGTCTAAGGACATAGAGGTTGATGGAAAGGAAGCCACCGTGAGGAATCTTGAAGATTCCATTGGTGTTCTTGATGTCTACATACATGAAGCTAGGGACATTCATAACATTTGCATATACCACAAGCAAGATGTTTATGCTAAGATTTGCTTAACGAGCAATCCTGACAACACTGTGTCCACCAAGATCATTAATGGAGGTGGAAGGAACCCTGTGTTCAATGAGAATCTTCGCTTAAATGTTAAAACTGTTGATTCATCTCTCAAATGTGAGATATGGATGCTGAGCAGGGTCAAGAATTATCTAGAAGATCAGCTTCTTGGTTTTGCCTTGGTTCCTTTGTCTGAAGTGCTTGTCAAGAATGGAAGAACACTTGAGAAAGAGTTCTCTCTTTCTTCAACTGATCTCTTCCATTCCCCGGCTGGTTTTGTCCAATTGTCCCTGGCATACGCTGGAGATTCCCCTGATGTCATGGTGATCCCTCCTTCGGTCTCCACCGAGGCTGCAGCAGCAGCCGCCGACGCTGTGGCTCTGGACCCTGAAACCACCGAGTCGCTGGCCAAAGATTTGGATAAAATCGAGTTCCCGGATCCGAAGATTGTGAATGAAGACCACCTGATGGCTTCAGAATATTTTGGGGTTTCTTGTGATGAGAACCAGTGTTCTGAAAGTCTGGACGCTTCTGATGCTGATCATCATAGCTCTGATGCAGGCGTTCAACTCGTAGAAAGCTTCTCAGCAGGCAGTGTTAAGTCTGATCAACCTTCCATTAACAAAGTTGATTCACCACCAAGCATTGTATCAACAAATGGGGTTTCTTCCCCATCAGTGCAAGCTAGCTCAGACTCATCTGATGCTGCTGCTCCTCTGGCTGCATCAAAATCCCCCACTCGGGAAGAAGTTTCCGGTGCCAAACAAGAGAAACACATGGCAGTGGCATCGGAGGATATTAAAGATCAAGTGGGTGAGAGTGATTCCTCAAGCAAGGTGGTTCCAAACAAAGAAGACGAATCATTCCCAAAGCCTGTTGTGTCTGTGAACATTGAGCCAGAACCAATGGTGGTTCAGCAGGATATAGTAGACATGTACATGAAAAGCATGCAGCAGTTCACCGAGTCGTTGGCCAAGATGAAGCTTCCAGATATCGATATCGGGTTGCCGAGCTCAGGAAACTCTAGCTCAGACAAGAAATTGGAATCACCAGCATCATCAAAGAGCAACAACAATAACTCTCGTGTGTTTTATGGGAGCAGAGCTTTCTTCTGA 1314 0.4581 MDSPQSVVSPFKNSLLGSKDIEVDGKEATVRNLEDSIGVLDVYIHEARDIHNICIYHKQDVYAKICLTSNPDNTVSTKIINGGGRNPVFNENLRLNVKTVDSSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVKNGRTLEKEFSLSSTDLFHSPAGFVQLSLAYAGDSPDVMVIPPSVSTEAAAAAADAVALDPETTESLAKDLDKIEFPDPKIVNEDHLMASEYFGVSCDENQCSESLDASDADHHSSDAGVQLVESFSAGSVKSDQPSINKVDSPPSIVSTNGVSSPSVQASSDSSDAAAPLAASKSPTREEVSGAKQEKHMAVASEDIKDQVGESDSSSKVVPNKEDESFPKPVVSVNIEPEPMVVQQDIVDMYMKSMQQFTESLAKMKLPDIDIGLPSSGNSSSDKKLESPASSKSNNNNSRVFYGSRAFF 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1515 437 SMART C2_3c 39 142 IPR000008 -
Lele25g1515 437 Pfam C2 domain 38 145 IPR000008 -
Lele25g1515 437 MobiDBLite consensus disorder prediction 316 352 - -
Lele25g1515 437 Gene3D C2 domain 33 184 IPR035892 -
Lele25g1515 437 ProSiteProfiles C2 domain profile. 15 145 IPR000008 -
Lele25g1515 437 PANTHER EXPRESSED PROTEIN 1 437 - -
Lele25g1515 437 MobiDBLite consensus disorder prediction 263 361 - -
Lele25g1515 437 MobiDBLite consensus disorder prediction 402 431 - -
Lele25g1515 437 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 173 IPR035892 -
Lele25g1515 437 MobiDBLite consensus disorder prediction 397 437 - -
Lele25g1515 437 MobiDBLite consensus disorder prediction 263 306 - -
Lele25g1515 437 CDD C2 40 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1515 Lele-ChrLele25 11757055 11758368 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1515 25 11757055 11758368 Lele27g0575 27 13467315 13468541 hybridization
Lele25g1515 25 11757055 11758368 Lele28g1525 28 12096893 12098161 hybridization