Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1536 ATGGATTCTCCTCAATCTGTTGTGTCACCTTTCAAGAACTCTGTGTTGGGTGATAATGAGAAGCAAAAATCTGCTAAGGACATGGAGGTGAATGGAAAGGAAGCCACCATGCGGAATCTAGAAGATTCCATTGGTGTTCTTGATGTCTTCATACATCAAGCTAGGGACATTCATAACATTTGCATATATCACAAGCAAGATGTTTATGCTAAGATTTGCTTAACTAGCAATCCTGATGATAGTGTGTCCACCGAGATCATTAATGGAGGTGGAAGGAACCCTGTGTTCAATGAGAATCTTCGGTTAAATGTTAAAACTGTTGATTCCTCTCTCAAATGTGAGATATGGATGCTGAGCAGGGTCAAGAATTATCTAGAAGATCAACTTCTTGGTTTTGCATTGGTTCCTTTGTCTGAAGTTCTTGTCAAGAATGGAAGAACACTTGAGAAAGAGTTCTCTCTTTCTTCAACTGATCTGTTCCATTCTCCGGCCGGCTTTGTCCTATTGTCCCTCGCATATGCCGGAGCTTTCCCTGATGTCATGGTGATCCCTCCTTCCTCGGTCTCCACCGAGGCCGCTGCATCAGCCGCCGATGCCGTGGCTCTGGACCCTGAGACCACCGAGTCTCTGGCCAAAGATTTAGATAAAATCGAGTTCCCAGATCCGAAGATTGTGAATGAAGATCACTTAATGGTTTCAGAATACTTTGGGATTTCTTGTGATGAGACCCAATGTTCTGAAAGTCTGGCCACTTCTGACGCTGATCATCATAGCTCTGATGCAGGTGTTCAACTTGTAGAAAGCTTCTCAGCTTGCAGTGTTGAGTCTGCTCAACCTTCCATCAACAAGGTTGATTCACCACCAAGCATTGTATCAACAAATGGGGTTTCTTCCCCATCAGTGCAAGCTAGCTCAGACTCATCTGATGCTGCTGCTCCTCCAGCTGCATCGAAATTCCCCACTCGGGAACAACTTTCCGGCGCCAAACAAGAGAAATGTGTGGCGGCATCGGCATCAGAGGATGTTAAAGATGGAGTGGGTGAGAGTGATTCCTCAAGCAAAGTAGTTCCAAAACAAGAAGATGAATCATCATTCCCTAAGCCTGTTGTGTCTGTGAACATTGAGCCAGAACCAATGGTGGTTCAGCAGGATATAGTAGACATGTACATGAAAAGCATGCAGCAGTTCACCGAGTCATTGGCGAAGATGAAGCTTCCAGATATCGATATAGGGTCGCCGACTCCAAGCTCAGGGAACTCGAGCTCAGACAAGAAATTGGAATCACCAGCATCATCAAAGAGCAACAATAATAACTCTCGTGTGTTTTATGGAAGCAGAGCTTTCTTCTGA 1350 0.4489 MDSPQSVVSPFKNSVLGDNEKQKSAKDMEVNGKEATMRNLEDSIGVLDVFIHQARDIHNICIYHKQDVYAKICLTSNPDDSVSTEIINGGGRNPVFNENLRLNVKTVDSSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVKNGRTLEKEFSLSSTDLFHSPAGFVLLSLAYAGAFPDVMVIPPSSVSTEAAASAADAVALDPETTESLAKDLDKIEFPDPKIVNEDHLMVSEYFGISCDETQCSESLATSDADHHSSDAGVQLVESFSACSVESAQPSINKVDSPPSIVSTNGVSSPSVQASSDSSDAAAPPAASKFPTREQLSGAKQEKCVAASASEDVKDGVGESDSSSKVVPKQEDESSFPKPVVSVNIEPEPMVVQQDIVDMYMKSMQQFTESLAKMKLPDIDIGSPTPSSGNSSSDKKLESPASSKSNNNNSRVFYGSRAFF 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1536 449 MobiDBLite consensus disorder prediction 279 311 - -
Lele26g1536 449 MobiDBLite consensus disorder prediction 1 18 - -
Lele26g1536 449 SMART C2_3c 46 149 IPR000008 -
Lele26g1536 449 Gene3D C2 domain 40 181 IPR035892 -
Lele26g1536 449 PANTHER EXPRESSED PROTEIN 1 449 - -
Lele26g1536 449 ProSiteProfiles C2 domain profile. 32 152 IPR000008 -
Lele26g1536 449 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 45 178 IPR035892 -
Lele26g1536 449 MobiDBLite consensus disorder prediction 1 29 - -
Lele26g1536 449 Pfam C2 domain 45 152 IPR000008 -
Lele26g1536 449 MobiDBLite consensus disorder prediction 412 443 - -
Lele26g1536 449 MobiDBLite consensus disorder prediction 343 361 - -
Lele26g1536 449 MobiDBLite consensus disorder prediction 404 449 - -
Lele26g1536 449 MobiDBLite consensus disorder prediction 279 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1536 Lele-ChrLele26 11588648 11589997 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1536 26 11588648 11589997 Lele27g0575 27 13467315 13468541 hybridization
Lele26g1536 26 11588648 11589997 Lele28g1525 28 12096893 12098161 hybridization