Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1299 ATGTCTGTAACTTGCGGGGTTGAGTGCGTCTTCATACTTGGCTTTTCTCGCTGGATGTGGAAGCGCTGTACCTATGTCGGCTCTTACGACAGCGCCACCTGGCCTTCCGCCACCGCCGATGAGTTTGAACCTGTCCCTCGCGCCTGCCGATTGATCCTCGCCATCTACGAGCCTGATCTCCGTAAACCACATTACGAACCTGCCGGTGGGTTCCGTCTCAACCCTGATTGGGTCGTCAAGCGCGTCTCCTACCAGGAGGCGGGGGGACACACGCCGCCTTATCTCATTTACACTGACCACGACCACCGTGAGATTGTGCTGGCCGTTCGGGGACTTAATCTCGCCGTGGAGAGCGATTACAAGCTGCTTTTGGATAATCGATTGGGTCAGCAGATGTTTGATGGTGGCTATGTTCATTACGGTTTGTTGAAATCTGCTCTTTGGTTGCTAAAACAGGAATCGGAGACTCTGAAGCAGTTGTGGATTGACAGTGGGGCTGATTATAAAATGGTATTTGCTGGGCATTCTTTGGGTTCTGGTGTGGTTTCGTTGTTGACAATACTGGTTGTCAATCATAGGGACCGATTTGGAGGGATTCCCAGGAACAAGATTCAATGTTATGCGATTGCACCTGCGAGGTGCATGTCACTGAATTTGGCGGTCAAATATGCGGATGTCATACATTCTATAGTGTTGCAGGATGATTTCTTACCCAGAACCCCAACGCCATTGGAAGATATATTCAAGTCAATCTTCTGCTTGCCCTGCTTATTATTCTTGGTTTGCTTGAGGGACACCTTCATACCAGAAGGGAGAAAGCTTAGAGATCCAAGAAGACTTTATGCACCTGGACGAATGTACCATATCGTGGAAAGAAAATTTTGCAGATGGGGGAGGTTCCCTCCAGAAGTGAGGACTGCTATTCCAGTTGATGGGAGATTTGAGCATATTGTCTTGTCTTGTAATGCAACAGTAGACCATGGAATTATTTGGATTGAAAGAGAAGCAGAGAAGGCTTTAAATAAAATGAAAGATGGCAGCCCAGAGACCGTGACGGCTCCTCCAACGGTACAGAAAATGCAGAGGTTGCGGACAATTGAGAAAGAGCACAAGGATGCTTTGGAAAGAGCTGTTAGCTTAAATGTGCCTCATGCAGTTGAAGCTGCGGAGGATGAAGCCTCTGAGAGGGAGGGGGAGGAGGAAGGAGAGGGAGATGAACCTTTCCACGACAATGATAAGAGCAAAGATGGCACAAGTAGCAAATCAGAGTCAAGTGCTGGAAGGCTGAATTGGGATGAAGTTGTTGAAAAACTTTTCAATAAGAGTGAAACTGGAGATCTGCGTCTCAAAAGGGATACAAGTACAGCAGATTCAGCCAACTCAATTAGGATTTGTTTGAGCTTAATGGGGCAGAGTCACAAGGATCTCGAGATCAATCAAATCAATCTCTTAAAAGAAGTGGAGATAGAGTCAACCAAAAAACAGCACCCAAACCATCTAATATCTGAGATAACTTCCAGAATCATCACCCACTTCATTCATTTCATCCCCTAA 1554 0.4672 MSVTCGVECVFILGFSRWMWKRCTYVGSYDSATWPSATADEFEPVPRACRLILAIYEPDLRKPHYEPAGGFRLNPDWVVKRVSYQEAGGHTPPYLIYTDHDHREIVLAVRGLNLAVESDYKLLLDNRLGQQMFDGGYVHYGLLKSALWLLKQESETLKQLWIDSGADYKMVFAGHSLGSGVVSLLTILVVNHRDRFGGIPRNKIQCYAIAPARCMSLNLAVKYADVIHSIVLQDDFLPRTPTPLEDIFKSIFCLPCLLFLVCLRDTFIPEGRKLRDPRRLYAPGRMYHIVERKFCRWGRFPPEVRTAIPVDGRFEHIVLSCNATVDHGIIWIEREAEKALNKMKDGSPETVTAPPTVQKMQRLRTIEKEHKDALERAVSLNVPHAVEAAEDEASEREGEEEGEGDEPFHDNDKSKDGTSSKSESSAGRLNWDEVVEKLFNKSETGDLRLKRDTSTADSANSIRICLSLMGQSHKDLEINQINLLKEVEIESTKKQHPNHLISEITSRIITHFIHFIP 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1299 517 Pfam Lipase 3 N-terminal region 7 70 IPR005592 GO:0016042
Lele28g1299 517 Pfam Lipase (class 3) 107 242 IPR002921 GO:0006629
Lele28g1299 517 Gene3D alpha/beta hydrolase 37 255 IPR029058 -
Lele28g1299 517 MobiDBLite consensus disorder prediction 376 427 - -
Lele28g1299 517 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 452 - -
Lele28g1299 517 MobiDBLite consensus disorder prediction 392 406 - -
Lele28g1299 517 CDD Lipase_3 41 242 - -
Lele28g1299 517 SUPERFAMILY alpha/beta-Hydrolases 38 243 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1299 Lele-ChrLele28 8739977 8745236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1299 1 341 Miscellaneous Gene Families AT5G37710 75.731 0.0 557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1303 25 8811162 8814889 Lele28g1299 28 8739977 8745236 hybridization
Lele26g1307 26 8777317 8782906 Lele28g1299 28 8739977 8745236 hybridization