Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1303 ATGTCTGTAACTTGCGGGGTCGAGTGCGTCTTCATACTTGGCTTTTCTCGCTGGATGTGGAAGCGCTGTACCTATGTCGGCTCTTACGACAGCGCCACATGGCCTTCCGCCACTGCCGATGAGTTTGAACCCGTCCCTCGCGCCTGCCGATTGATCCTCGCCATCTACGAGCCTGATCTCCGCAAACCACATTGCGAACCTGCCGGTGGGTTTCGTCTCAATCCCGATTGGGTCGTCAAGCGCGTCTCCTACGAGGAGGCAGGGGGCCACACGCCGCCTTATCTCATTTACACTGACCACGACCACCGTGAGATTGTGCTAGCCGTTCGGGGACTTAATCTCGCCGTGGAGAGCGATTACAAGCTGCTTTTGGATAATCGATTGGGTCAGCAGATGTTCGATGGTGGCTATGTTCATCATGGTTTGTTGAAATCTGCTCTTTGGCTGCTAAAACAGGAATCGGAGACTCTGAAGCAGTTGTGGATTGAAAACGGGTCCGACTATAAAATGGTATTTGCTGGGCATTCTTTGGGTTCTGGTGTGGTTTCGTTGTTGACGATACTGGTTGTCAATCATAGGGACCGATTTGGAGGGATTCCCAGGAACAAGATTCAATGTTATGCAATTGCACCTGCGAGGTGCATGTCTCTGAATTTGGCGGTCAAATATGCGGATGTCATACATTCTATAGTGTTGCAGGATGATTTCTTACCCAGAACCCCAACGCCATTGGAAGATATATTCAAGTCAATCTTCTGCTTGCCCTGCTTATTATTCTTGGTTTGCTTGAGGGACACCTTCATACCAGAAGGAAGAAAGCTTAGAGATCCAAGAAGACTTTATGCACCTGGACGAATGTACCATATCGTGGAAAGAAAATTTTGCAGATGTGGGAGGTTCCCTCCAGAAGTGAGGACTGCTATTCCAGTTGATGGGAGGTTTGAGCATATTGTCTTGTCTTGTAATGCAACAGCAGACCATGGAATTATTTGGATTGAAAGAGAAGCCGATAAGGCTTTAAATAAAATGAAAGACGGCAGCCCAGAGACCGTGACGGCTCCTCCAACAGTACAGAAAATGCAGAGGTTGCAGACAATTGAGAAAGAGCACAAGGATGCTTTGGAAAGAGCTGTTAGCTTAAAAGTGCCTCATGCAGTGGAATCTGCAGATGATGAAGCCTCTGAGAGGAAGAAGGAGGAAGAAGAGGGAGATGAACCTTCCAACAACAATGATAAGAGCAAAGAAGGCGCAAGTAGCAAATCAGAGTCAAGTGCTGGAAGTAGGCTGAATTGGGATGAAGTTGTTGAGAAACTTCTCAATAAGAGTGAAACAGGAGATCTGCGTTTCAAAAGGGATACAAGTACAGCAGATTCAAGTGTCCCAAAATGA 1389 0.473 MSVTCGVECVFILGFSRWMWKRCTYVGSYDSATWPSATADEFEPVPRACRLILAIYEPDLRKPHCEPAGGFRLNPDWVVKRVSYEEAGGHTPPYLIYTDHDHREIVLAVRGLNLAVESDYKLLLDNRLGQQMFDGGYVHHGLLKSALWLLKQESETLKQLWIENGSDYKMVFAGHSLGSGVVSLLTILVVNHRDRFGGIPRNKIQCYAIAPARCMSLNLAVKYADVIHSIVLQDDFLPRTPTPLEDIFKSIFCLPCLLFLVCLRDTFIPEGRKLRDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNATADHGIIWIEREADKALNKMKDGSPETVTAPPTVQKMQRLQTIEKEHKDALERAVSLKVPHAVESADDEASERKKEEEEGDEPSNNNDKSKEGASSKSESSAGSRLNWDEVVEKLLNKSETGDLRFKRDTSTADSSVPK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1303 462 MobiDBLite consensus disorder prediction 434 455 - -
Lele25g1303 462 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 452 - -
Lele25g1303 462 Pfam Lipase 3 N-terminal region 7 70 IPR005592 GO:0016042
Lele25g1303 462 Pfam Lipase (class 3) 107 242 IPR002921 GO:0006629
Lele25g1303 462 MobiDBLite consensus disorder prediction 385 418 - -
Lele25g1303 462 CDD Lipase_3 41 242 - -
Lele25g1303 462 Gene3D alpha/beta hydrolase 35 256 IPR029058 -
Lele25g1303 462 MobiDBLite consensus disorder prediction 377 462 - -
Lele25g1303 462 SUPERFAMILY alpha/beta-Hydrolases 38 243 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1303 Lele-ChrLele25 8811162 8814889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1303 1 341 Miscellaneous Gene Families AT5G37710 76.608 0.0 566
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1303 25 8811162 8814889 Lele27g0785 27 15961375 15968060 hybridization
Lele25g1303 25 8811162 8814889 Lele28g1299 28 8739977 8745236 hybridization