Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1307 ATGGATCAAGTGATACAAAATCTTCCATAACTTCCTGCATGGAAACCAATTCTAACACTAGGATGGGTCATTTCCACATTTGCTTTAACCGGAATCATTTTCATTCCTGTTGGCCTCGCATCATTATCGGCATCAGAAAAGGTTGTGGAACTTCCATTTCGGTATGACCAACAATGCATTCCTCATGATTATAGTAACAATCCAGAGGCATATATTAAAAGCACTACTGCCAACAAGACATGCACTGCGACATGCAAAGTTGAAAAGGCAATGAAATCCCCAGTAAGGACTTTTATGTGCGTCTTCATACTTGGCTTTTCTCGCTGGATGTGGAAGCGCTGTACCTATGTCGGCTCCTACGACAGCGCCACCTGGCCTTCCGCCACCGCCGATGAGTTTGAACCCGTCCCTCGCGCCTGCCGATTGATCCTCGCCATCTACGAGCCTGATCTCCGTAAACCACATTACGAACCTGCCGGTGGGTTCCGTCTCAACCCTGATTGGGTCGTCAAGCGCGTCTCCTACGAGGAGGCGGGGGGACACACGCCGCCTTATCTCATTTACGCTGACCACGACCACCGTGAGATTGTGCTGGCCGTTCGGGGACTTAATCTCGCCGTGGAGAGCGATTACAAGCTGCTTTTGGATAATCGATTGGGTCAGCAGATGTTCGATGGTGGCTATGTTCATTACGGTTTGTTGAAATCTGCTCTTTGGTTGCTAAAACAGGAATCGGAGACTCTGAAGCAGTTGTGGATTGACAGTGGGGCTGATTATAAAATGGTATTTGCTGGGCATTCTTTGGGTTCTGGTGTGGTTTCGTTGTTGACGATACTGGTTGTCAATCATAGGGACCGATTTGGAGGGATTCCCAGGAACAAGATTCAATGTTATGCGATTGCACCTGCGAGATGTGGGAGGTTCCCTCCAGAAGTGAGGACTGCTATTCCAGTTGATGGGAGATTTGAGCATATTGTCTTGTCTTGTAATGCAACAGCAGACCATGGAATTATTTGGATTGAAAGAGAAGCAGAGAAGGCTGTAAATGAAATTTTTACCATGTGGCCCTTACTAAATTCCTTCATATCTGAATCTGCTTATGCAAGCAAGTTCTCCATCTCTTCTGCACACAGACTCAGATTTTCTGTTTTTTCTTTTCAGAAAATGAAAGATGGCAGCCCAGAGACCGTGACGGCTCCTCCAACGGTACAGAAAATGCAGAGGTTGCGGACAATTGAGAAAGAGCACAAGGATGCTTTGGAAAGAGCTGTTAGCTTAAATGTGCCTCATGCAGTGGAAGCTGCAGAGGATGAAGCCTCTGAGAGGGAGGAGGAGGAGGAGGAAGGAGAGGGAGATGAACCTTCCAACAATAATGATAAGAGCAAAGATGGCACAAGTAGCAAATCAGAGTCAAGTGCTGGAAGGCTGAATTGGGATGAAGTTGTTGAAAAACTTTTCAATAAGAGTGAAACTGGAGATCTGCGTCTCAAAAGGGATACAAGTACAGCAGATTCAAGTGTCCCAAAATGA 1530 0.4641 MDQVIQNLPXLPAWKPILTLGWVISTFALTGIIFIPVGLASLSASEKVVELPFRYDQQCIPHDYSNNPEAYIKSTTANKTCTATCKVEKAMKSPVRTFMCVFILGFSRWMWKRCTYVGSYDSATWPSATADEFEPVPRACRLILAIYEPDLRKPHYEPAGGFRLNPDWVVKRVSYEEAGGHTPPYLIYADHDHREIVLAVRGLNLAVESDYKLLLDNRLGQQMFDGGYVHYGLLKSALWLLKQESETLKQLWIDSGADYKMVFAGHSLGSGVVSLLTILVVNHRDRFGGIPRNKIQCYAIAPARCGRFPPEVRTAIPVDGRFEHIVLSCNATADHGIIWIEREAEKAVNEIFTMWPLLNSFISESAYASKFSISSAHRLRFSVFSFQKMKDGSPETVTAPPTVQKMQRLRTIEKEHKDALERAVSLNVPHAVEAAEDEASEREEEEEEGEGDEPSNNNDKSKDGTSSKSESSAGRLNWDEVVEKLFNKSETGDLRLKRDTSTADSSVPK 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1307 509 Gene3D alpha/beta hydrolase 129 310 IPR029058 -
Lele26g1307 509 MobiDBLite consensus disorder prediction 438 453 - -
Lele26g1307 509 MobiDBLite consensus disorder prediction 414 509 - -
Lele26g1307 509 Coils Coil 432 452 - -
Lele26g1307 509 CDD Lipase_3 132 306 - -
Lele26g1307 509 MobiDBLite consensus disorder prediction 481 502 - -
Lele26g1307 509 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 304 349 - -
Lele26g1307 509 Pfam Lipase (class 3) 198 306 IPR002921 GO:0006629
Lele26g1307 509 SUPERFAMILY alpha/beta-Hydrolases 129 328 IPR029058 -
Lele26g1307 509 Pfam Lipase 3 N-terminal region 98 161 IPR005592 GO:0016042
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1307 Lele-ChrLele26 8777317 8782906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1307 303 354 Miscellaneous Gene Families AT5G37710 78.846 1.23e-20 91.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1307 26 8777317 8782906 Lele27g0785 27 15961375 15968060 hybridization
Lele26g1307 26 8777317 8782906 Lele28g1299 28 8739977 8745236 hybridization