Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1129 ATGGCCAGCCAAGACCTCTCCTCTTCCATGACCTCCGACATCGAGACCTACTCTGGCAAAGACCCTCTTCTTCCTTGGCTCCGAGGGATTCGAAAGATGAAGGACACTCTGTCTCCTGCGGCCCTCAATGAGAATCTGCCGGAGTTCTTACAGACATGTGCGCGGACTTTTGAATCCGATCGACGCTACCGAAACGACATGCGGTATCTTATGATTTGGCTGCACTTGTTTGTTGGCATTACCCTCTTCAGAAGGTCGGAGGCCGAAAATGCCTGCCATCATGGGCCGGTGGATCCTACGATAAATATGAAGGAGGCAATGAATGCCATTAATAGCCAATCTCATCAAGAACCACTTCAAATATACATGGATGATGAAGGACATAGTGAAACTAGTGACATAAACGATGAACAGAGTGATGTCCGGAATGCATTTGTCTTTCCCCGTCCCAAGGATCTTCCTTCTGAAAGTTCTGGTGACATGGATGCACGAAGTTCCCGTAAGTCAAAGTTCAGAGAGGATACAGTTGTGGGCCGATTTGTTGGCTCCACCATTTTGGATGAGCCAGAGGAAAAGGCAACCGAGAGCAATAGCAGAAAAGAGTTTGGTGGGTTTTCAATTCTTGCTGATGATGAGTTGGAACATAAAAAAGGTCCACAACAACCTCCAAAACTGGCACGGAAGTTAAAGGATTCTGATTTATTTGAACCAACTCTCCTCACTAAGGAGGCAATGGACGACATAAACAACATGTTCAATATGCCATTGAATTTTTAA 777 0.4582 MASQDLSSSMTSDIETYSGKDPLLPWLRGIRKMKDTLSPAALNENLPEFLQTCARTFESDRRYRNDMRYLMIWLHLFVGITLFRRSEAENACHHGPVDPTINMKEAMNAINSQSHQEPLQIYMDDEGHSETSDINDEQSDVRNAFVFPRPKDLPSESSGDMDARSSRKSKFREDTVVGRFVGSTILDEPEEKATESNSRKEFGGFSILADDELEHKKGPQQPPKLARKLKDSDLFEPTLLTKEAMDDINNMFNMPLNF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1129 258 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 8 76 IPR015661 GO:0007094
Lele28g1129 258 SMART mad3_bub1_i 3 96 IPR013212 -
Lele28g1129 258 MobiDBLite consensus disorder prediction 155 170 - -
Lele28g1129 258 MobiDBLite consensus disorder prediction 207 230 - -
Lele28g1129 258 ProSiteProfiles BUB1 N-terminal domain profile. 10 169 IPR013212 -
Lele28g1129 258 Gene3D - 7 124 - -
Lele28g1129 258 Pfam Mad3/BUB1 homology region 1 9 76 IPR013212 -
Lele28g1129 258 MobiDBLite consensus disorder prediction 147 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1129 Lele-ChrLele28 7305380 7307841 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g1129 28 7305380 7307841 Lele28g1129 28 7305380 7307841 ECH
Lele25g1137 25 7320396 7322856 Lele28g1129 28 7305380 7307841 hybridization
Lele26g1138 26 7318651 7321091 Lele28g1129 28 7305380 7307841 hybridization