Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1137 ATGACCAGCCAAGACCTCTCGTCTTCCATAAGATCCGACATCGAGACCTACTCTGGCAAAGACCCTCTTCTTCCTTGGCTCCGAGGAATTCGAAAGATGAAGGACACTTTGTCTCCTGCGGCCCTCAATGAGAAGCTGCCGGAGTTCTTACAGAAATGTGCGCGGACTTTTCAGTCCGATCGACGCTACCGAAACGACATGCGGTATCTTCGGATTTGGCTGCACTTGGGCAAGAAGTTTTGTGATGAACCCACAGTTGTTGGCAAGTTTGTTGGCACTGCCCTTGTCGGAAGGTCGGAAGCCGAAAATGCCTGCCACCATGGACTGTTGGATCCTACAATAAATATGAAGGAAGCAATGGATGCCATTAATAGTATGTTCAGTGAGCCACTAGAGGATGTTCCTATAGCCAAGAAATCACACAAAAACCGATCGAAGGAAGATCACTCTGCACAGAAGGGATTAGAGGTTTTTATTGATGAAAGTTCGGATAACGGAATCAAACCTTCAGCTTCTTCATCTCTGCAGCACAATACTGAAGCAGGCCAATCTCATCAAGAACCACTTCAAATATACATTGATGATGATGAAGGATGTAGTGAAACTAGTGACATAAACGATGAAGAGAGTGATGTCCGGAATGCCTTTGTCTTTCCCCGTCCTAAGGATCTTCCTTCTGAAAGTTCTGGTGACAGGGATGCACGAAGTTCCTGCAAGTCAAAGTTCAGAGAGGATACAGTTGTTGGCCGATTTGTTGGCTCCACCATTTTGGATGAGTCAGAGGTAGAAAATGCTTGCCACCATGGTTTAGTAGACCCCACAATCAACATGAAGGAAGCTATGAATGACATAAATAACATGTTTGGGAAACCAATAGATTTCATTAGGCGTAAAAGATCCACGAAGCAGGAAAAGGCACATGAGAGCAATAGCAGAAAAGATTTTGATGGGTTTTCAATTCTTGCTGATGATGACATGGAACATCAAAAAGGTCCACAACAACCTCGAAAACTGGCAGGAAAGTCAACGGATTCTGATTTATTTGAGCCAACTCTGCTCACTAAGGAGGCAATGGACGACATAAACAAGATGTTCAATATGCCATTGAATTTTTAA 1116 0.44 MTSQDLSSSIRSDIETYSGKDPLLPWLRGIRKMKDTLSPAALNEKLPEFLQKCARTFQSDRRYRNDMRYLRIWLHLGKKFCDEPTVVGKFVGTALVGRSEAENACHHGLLDPTINMKEAMDAINSMFSEPLEDVPIAKKSHKNRSKEDHSAQKGLEVFIDESSDNGIKPSASSSLQHNTEAGQSHQEPLQIYIDDDEGCSETSDINDEESDVRNAFVFPRPKDLPSESSGDRDARSSCKSKFREDTVVGRFVGSTILDESEVENACHHGLVDPTINMKEAMNDINNMFGKPIDFIRRKRSTKQEKAHESNSRKDFDGFSILADDDMEHQKGPQQPRKLAGKSTDSDLFEPTLLTKEAMDDINKMFNMPLNF 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1137 371 Gene3D - 8 102 - -
Lele25g1137 371 SMART mad3_bub1_i 2 109 IPR013212 -
Lele25g1137 371 MobiDBLite consensus disorder prediction 326 345 - -
Lele25g1137 371 MobiDBLite consensus disorder prediction 165 186 - -
Lele25g1137 371 MobiDBLite consensus disorder prediction 162 239 - -
Lele25g1137 371 Pfam Mad3/BUB1 homology region 1 9 97 IPR013212 -
Lele25g1137 371 MobiDBLite consensus disorder prediction 225 239 - -
Lele25g1137 371 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 11 82 IPR015661 GO:0007094
Lele25g1137 371 ProSiteProfiles BUB1 N-terminal domain profile. 10 180 IPR013212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1137 Lele-ChrLele25 7320396 7322856 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1137 25 7320396 7322856 Lele25g1137 25 7320396 7322856 ECH
Lele25g1137 25 7320396 7322856 Lele27g0943 27 17337325 17340653 hybridization
Lele25g1137 25 7320396 7322856 Lele28g1129 28 7305380 7307841 hybridization