Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1138 ATGGCCAGTCAAGACCTCTCCTCGTCCATAACCTCCGACATCGAGACCTACTCTGGCGAAGACCCTCTTCTTCCTTGGCTCCGAGGAATTCGAAAGATGAAGGACACTCTGTCTCCTGCAGCCCTCAATGAGAAGCTGCCGGAGTTCTTACAGACATGTGCGCGGACTTTTGAGTCCGATCGACGCTACCGAAACGACATGCGGTATCTTCGGATTTGGCTGCACTTGATGGATTTTGTAGATGATCCATTGTCCCTTTTGAAAACCATGGAGGTTAATCATATTGGGACAAAACGCTGTCAGTTCTACCAAGCATATGCTCTTTACTACGAAAAGAACAAGAGATATGATGAGGCTGAGAAAATGTACCATTTGGGAGTGAAAAACCTTGCAGAACCTATGGATGACTTGCAAAAATCATATGAACAATTTCTTGGTCGCATGGAAAGAAAGAAAAACAAAAAAATCCAGCTGGAAGGGAGAGCTTCCAGGAGGCCTCTGTCTACAAAGAATAATCCACCTCATTTCAACAAGATTGAGGGAAAAAGTGAAGCGTCTGGCATTGAGAGTGTTCATATAGGACCCCAAATTGCTAGTTCTGTTGGTAAAGGCCTTTCTGATGAAAGACTTAAAAAGGATCAGGTCAAGAGGTTTTGTGATGAACCCACAGTTGTTGGCAAGTTTGTTGGCACTGCCCTCTTCGGAAGGTCGGAAGCCGAAAATGCCTGCCATCATGGGCTAGTGGATCCTACGATAAATATGAAGGAAGCAATGAATGCCATTAATAGTATGTTCAGTGAGCCACTAGAGGATGTTCCTATAGCCAAGAAGTCACACAAAAATCGATTGAAGGAAGGTCACTTTGCACAGAAGGGATTGGAGGTTTTTATTGATGAAAGCTCTGATGATGAAATCAAACCATCAGCTTCTTCGTCATCTCTGCATTACAATACTGAAGCAGGCCAGTCTCATCAAGAACTACTTAAAATATACATGGATGATGAAGGACATAGTGAAACTAGGGACATAAACGATGAACAGAGTGGTGTCCGGAATGCCTTTGTCTTTCCCCGTCCCAAGGATCTTCCTTCTGAAAGTTCTGGTGACATGGATGCACGAAGTTCCCGTAAGTCAAAGTTCAGAGAGGATACAGTTGTTGGCCGATTTGTTGGCTCCACCATTTTGGATGAGCCGGAGGTAGAAAATGTTTGCCACCATGGTTTAGTAGACCCCACAATCAACATGAAGGAAGCTATGAATGACATAAATAACATGTTTGGGAAACCAATAGATTTTGTTAGGCGGAAAAGATCGACTAAGCAGGAAAAGGCACCCGAGAGCAATAGCAGAAAAGAGTTTGGTGGGTTTTCAATTCTTGCGGATGATGACTTGGAACATCAAAAAGGTCCACAACAACCTCCAAAACTGGCAGGGAAGTTAAGGGATTCTGATTTATTTGAGCCAACTCTCCTCACTAAGGAGGCAATGGACGACATAAACAAGATGTTTAATATGCCATTGAATTTTTAA 1530 0.4333 MASQDLSSSITSDIETYSGEDPLLPWLRGIRKMKDTLSPAALNEKLPEFLQTCARTFESDRRYRNDMRYLRIWLHLMDFVDDPLSLLKTMEVNHIGTKRCQFYQAYALYYEKNKRYDEAEKMYHLGVKNLAEPMDDLQKSYEQFLGRMERKKNKKIQLEGRASRRPLSTKNNPPHFNKIEGKSEASGIESVHIGPQIASSVGKGLSDERLKKDQVKRFCDEPTVVGKFVGTALFGRSEAENACHHGLVDPTINMKEAMNAINSMFSEPLEDVPIAKKSHKNRLKEGHFAQKGLEVFIDESSDDEIKPSASSSSLHYNTEAGQSHQELLKIYMDDEGHSETRDINDEQSGVRNAFVFPRPKDLPSESSGDMDARSSRKSKFREDTVVGRFVGSTILDEPEVENVCHHGLVDPTINMKEAMNDINNMFGKPIDFVRRKRSTKQEKAPESNSRKEFGGFSILADDDLEHQKGPQQPPKLAGKLRDSDLFEPTLLTKEAMDDINKMFNMPLNF 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1138 509 MobiDBLite consensus disorder prediction 434 455 - -
Lele26g1138 509 Pfam Mad3/BUB1 homology region 1 9 127 IPR013212 -
Lele26g1138 509 ProSiteProfiles BUB1 N-terminal domain profile. 10 166 IPR013212 -
Lele26g1138 509 MobiDBLite consensus disorder prediction 155 180 - -
Lele26g1138 509 MobiDBLite consensus disorder prediction 434 449 - -
Lele26g1138 509 Gene3D - 8 162 - -
Lele26g1138 509 MobiDBLite consensus disorder prediction 364 378 - -
Lele26g1138 509 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 8 509 IPR015661 GO:0007094
Lele26g1138 509 MobiDBLite consensus disorder prediction 337 378 - -
Lele26g1138 509 FunFam Mad3/BUB1 homology region 1 9 165 - -
Lele26g1138 509 Coils Coil 134 154 - -
Lele26g1138 509 SMART mad3_bub1_i 2 127 IPR013212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1138 Lele-ChrLele26 7318651 7321091 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1138 26 7318651 7321091 Lele26g1138 26 7318651 7321091 ECH
Lele26g1138 26 7318651 7321091 Lele27g0943 27 17337325 17340653 hybridization
Lele26g1138 26 7318651 7321091 Lele28g1129 28 7305380 7307841 hybridization