Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1107 ATGGGAAAATCACTGCAATCTGTGGCTAGGCTTCCGGAGTTATCGAGGATTCTCTCGTCCGCCAAAGCCCCTAAGCCCAACAAAGCTCTCACCAAATCGCCGAATCGTGTTGTGGCCCCGGCAGCTCTCAAATCTCAGGCATCGCAGCTGAAGATGGAAAGCTCCGAACGGGAGCGGAATCGGATTCCGCTCACCCAAGTGGTCGCCGACTGCACCAAGCGGTGGTTCCAGAACACTCTCAAGGAGGCTAAGGCCGGCGACCGCAATATGCAGGTCCTGGTCGGCCAAATGTACAACTCTGGCTATGGTGTTCCCAGAGACCCTCGAAAGGGACATGCTTGGATTAGCAAAGCATCTGCTCGAAGTTCAGCATGGAAAGCTAGCGAAAAGCCTCCAGGTTATGAAGCAAGTGACTCTGATTCGGATGAAATGCAGAACAAAGATAGATGA 450 0.5311 MGKSLQSVARLPELSRILSSAKAPKPNKALTKSPNRVVAPAALKSQASQLKMESSERERNRIPLTQVVADCTKRWFQNTLKEAKAGDRNMQVLVGQMYNSGYGVPRDPRKGHAWISKASARSSAWKASEKPPGYEASDSDSDEMQNKDR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1107 149 MobiDBLite consensus disorder prediction 133 149 - -
Lele28g1107 149 SUPERFAMILY HCP-like 80 120 - -
Lele28g1107 149 SMART sel1 88 123 IPR006597 -
Lele28g1107 149 MobiDBLite consensus disorder prediction 102 149 - -
Lele28g1107 149 Gene3D Tetratricopeptide repeat domain 6 128 IPR011990 GO:0005515
Lele28g1107 149 PANTHER EXPRESSED PROTEIN 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1107 Lele-ChrLele28 7175973 7176826 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0962 27 17455811 17456687 Lele28g1107 28 7175973 7176826 ECH
Lele28g1107 28 7175973 7176826 Lele28g1107 28 7175973 7176826 ECH
Lele25g1116 25 7206517 7207397 Lele28g1107 28 7175973 7176826 hybridization
Lele26g1115 26 7193837 7197850 Lele28g1107 28 7175973 7176826 hybridization