Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1116 ATGGGAAAGTCACTGCAATCTGCGGCTAGGCTTCAGGAGTTATCGAGGATTCTCTCGTCCGCCAAAGCCCCTAAGCCCAACAAAGCTCTCCCCAAATCGCCTAATCGTGTTGCGGCCCCGGCAGCTCTCAAATCTCAGGCATCGCAGCTGAAGATGGAAAGCTCCGAACGGGAGCGGAATCGGATTCCGCTCGCCCACGTGGTCGGTGATTGTGCCAAGCGGTGGTTCCAGGACACTCTCAAGGAGGCTAAGGCCGGCGACAGTAATATGCAGGTCCTGGTTGGCCAAATGTACAACTCTGGCTATGGTGTTCCCAGAGACCCTCGAAAGGGACATGCTTGGATTAGCAAAGCTTCAACGACTCGAAGTAAAGTATGGAAAGCTAGCGAAAAGCATCCAGGTTATAAAGCAAGTGACTCTGATTCGGATGAAATGGAGAACAAAGATAGATGA 453 0.521 MGKSLQSAARLQELSRILSSAKAPKPNKALPKSPNRVAAPAALKSQASQLKMESSERERNRIPLAHVVGDCAKRWFQDTLKEAKAGDSNMQVLVGQMYNSGYGVPRDPRKGHAWISKASTTRSKVWKASEKHPGYKASDSDSDEMENKDR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1116 150 PANTHER EXPRESSED PROTEIN 1 147 - -
Lele25g1116 150 MobiDBLite consensus disorder prediction 16 58 - -
Lele25g1116 150 SMART sel1 88 123 IPR006597 -
Lele25g1116 150 Gene3D Tetratricopeptide repeat domain 2 131 IPR011990 GO:0005515
Lele25g1116 150 SUPERFAMILY HCP-like 80 119 - -
Lele25g1116 150 MobiDBLite consensus disorder prediction 124 150 - -
Lele25g1116 150 MobiDBLite consensus disorder prediction 105 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1116 Lele-ChrLele25 7206517 7207397 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1116 25 7206517 7207397 Lele26g1115 26 7193837 7197850 ECH
Lele25g1116 25 7206517 7207397 Lele25g1116 25 7206517 7207397 ECH
Lele25g1116 25 7206517 7207397 Lele27g0962 27 17455811 17456687 hybridization
Lele25g1116 25 7206517 7207397 Lele28g1107 28 7175973 7176826 hybridization