Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0962 ATGGGAAAATCACTGCAATCTGCGGCTAGGCTTCAGGAGTTATCGAGGATTCTCTCGTCCGCCAAAGCCCCTAAGCCCAACAAAGTTCTCCCCAAATCGCCGAATCGTGTTGCGGCCCCGGCAGCTCTCAAATCTCAGGCATCGCAGCTGAAGATGGAAAGCTCCGAACGGGAGCGGAATCGGATTCCGCTCGCCCACGTGGTCGCCGATTGCGCCAAGCGGTGGTTCCAGGACACTCTCAAGGAGGCTAAGGCCGGCGACAGTAATATGCAGGTCCTGGTTGGCCAAATGTACAACTCTGGCTATGGTGTTCCCAGAGACCCCCGAAAGGGACGTGCTTGGATTAGCAAAGCATCAACGACTCGAAGTTCAGTATGGAAAGCTAGCGAAAAGCATCCAGGTTATAAAGCAAGTGACTCTGATTCGGATGAAATGGAGAACAAAGATAGATGA 453 0.5298 MGKSLQSAARLQELSRILSSAKAPKPNKVLPKSPNRVAAPAALKSQASQLKMESSERERNRIPLAHVVADCAKRWFQDTLKEAKAGDSNMQVLVGQMYNSGYGVPRDPRKGRAWISKASTTRSSVWKASEKHPGYKASDSDSDEMENKDR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0962 150 Gene3D Tetratricopeptide repeat domain 3 130 IPR011990 GO:0005515
Lele27g0962 150 MobiDBLite consensus disorder prediction 17 60 - -
Lele27g0962 150 MobiDBLite consensus disorder prediction 132 150 - -
Lele27g0962 150 MobiDBLite consensus disorder prediction 101 150 - -
Lele27g0962 150 PANTHER EXPRESSED PROTEIN 1 147 - -
Lele27g0962 150 SUPERFAMILY HCP-like 80 118 - -
Lele27g0962 150 SMART sel1 88 123 IPR006597 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0962 Lele-ChrLele27 17455811 17456687 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0962 27 17455811 17456687 Lele28g1107 28 7175973 7176826 ECH
Lele27g0962 27 17455811 17456687 Lele27g0962 27 17455811 17456687 ECH
Lele25g1116 25 7206517 7207397 Lele27g0962 27 17455811 17456687 hybridization
Lele26g1115 26 7193837 7197850 Lele27g0962 27 17455811 17456687 hybridization