Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0855 ATGAGAGCGGAGGACACCGAAGCTGCTCCAGGACCTATTGACCGTTACGGAGCAAGAATGATTGCTTCAAGAGAAAATCCAGCCTCTATGGTGCATCCAGCAGAAATTGGAGCGGGATTTTCCGAGTACGACTCACTCGTCCAGGCCGATCTTGCAAAGATTCTGCTCCTTCATTCAGAAGGAAGATCCGAGAACTGTGGGAGGGTGGGTTGGCTAGCAACCATTGGCTTCACTGTCAAGAATTTTCTAAACGTTACGTTAGAATGGATGACATTGGCTTTAGATGCTCCTTCTGCACGAGCTGTAGTTTTTGGAGTGCATATTGGTGGACATTTATTTGTTGAAGTTGTTCTCCTGGTGGTCATTCTTTTCCTGCTATCCCAGAAAAGTTACAAGCCTCCTAAACGGCCCTTGAGAGAAAAGGAAATAGATGAGCTATGTGATGAATGGGTGCCAGAACCGCTGATTCCTCCACTTAGTAAAGAGATGCAGTATGAACCACCAGTGCTGGAGAGTGCTTCTGGGCCACATATCATAGTTAATGGTAGAGAAGTCATTAACTTCGCTTCAGCAAACTATCTTGGATTGATAGGTCACAAGAAGCTACTTGAGTCATGTTCTTCTGCTTTAGGGAAATATGGTGTTGGTTCTTGTGGTCCTCGTGGATTCTATGGAACAATTGATGTCCACTTGGATTGTGAAGCCAGAATAGCAAAATTTCTGGGAACCCCTGATTCAATCTTGTACTCTTATGGATTTTCCACCATGTTTAGTGCGATTCCTGCTTTTTCTAAAAAAGGAGATATAATTGTTGTCGATGAGGGAGTCCATTGGGGGATACAAAATGGCCTTTATATTTCAAGAAGCACAGTGGTGTATTTTAAGCACAATGACATGGACTCTTTGAGAGAAACTCTGGAGAAAATTACTACAGAAAATAAGCGGGCCAAGAGAACGAGGCGGTACATTGTTGTTGAAGCTGTCTACCAGAATTCTGGTCAAATTGCCCCCTTGGATGAGATTATTAGATTGAAAGAGAAATACCATTTTCGTGTTTTGGTGGATGAGAGCAACTCAATCGGTGTGCTTGGAAGTTCAGGAAGAGGCCTCACTGAACATTTTGGAGTTCCGGTTGAGAAGTTAGATATCATAACTGCTGCTATGGGACATGCACTGGCCACAGAAGGAGGATTTTGCACGGGAAATGCTAGAGTTATAGATCACCAACGATTGAGTAGCTCTGGCTATGTCTTTTCTGCTTCTCTGCCCCCATATCTTGCTAGCGCTGCAATTTCAGCTATTGACATCCTAGAGGAAAATCCCAATCTGATAACAAAGCTGAAGGCTAATATTGCTTTACTATGGAAAGGATTATCAAACATGCAAGGCTTGATGATAGCAAGCAACCCAGAATCACCGATTGTTTATTTGAGATTGGAGAAGTCAACGGGTTCTATGAAAAATGACCTACGTCTGCTCGAAGATATAGTTGAGCGGATTTTGGAGGAAGATTCTGTCTTTGTCGTTGCTTCCAAAAGATCAACTTTGGACAAATGCCGTTTGCCGGTAGGAATCAGACTTTTTGTTTCTGCCGACCACTCAGAGTCAGATCTCTGTAAGGCAGCTGAATCATTGAAGAGGGTTGCAGCATTGGTCCTGAGTCGCCATTCTTGA 1674 0.4349 MRAEDTEAAPGPIDRYGARMIASRENPASMVHPAEIGAGFSEYDSLVQADLAKILLLHSEGRSENCGRVGWLATIGFTVKNFLNVTLEWMTLALDAPSARAVVFGVHIGGHLFVEVVLLVVILFLLSQKSYKPPKRPLREKEIDELCDEWVPEPLIPPLSKEMQYEPPVLESASGPHIIVNGREVINFASANYLGLIGHKKLLESCSSALGKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGFSTMFSAIPAFSKKGDIIVVDEGVHWGIQNGLYISRSTVVYFKHNDMDSLRETLEKITTENKRAKRTRRYIVVEAVYQNSGQIAPLDEIIRLKEKYHFRVLVDESNSIGVLGSSGRGLTEHFGVPVEKLDIITAAMGHALATEGGFCTGNARVIDHQRLSSSGYVFSASLPPYLASAAISAIDILEENPNLITKLKANIALLWKGLSNMQGLMIASNPESPIVYLRLEKSTGSMKNDLRLLEDIVERILEEDSVFVVASKRSTLDKCRLPVGIRLFVSADHSESDLCKAAESLKRVAALVLSRHS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0855 557 Gene3D Aspartate Aminotransferase, domain 1 178 543 IPR015422 GO:0003824
Lele28g0855 557 Pfam Aminotransferase class I and II 184 545 IPR004839 GO:0009058|GO:0030170
Lele28g0855 557 FunFam serine palmitoyltransferase 1 isoform X1 199 440 - -
Lele28g0855 557 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 110 548 - -
Lele28g0855 557 Gene3D - 199 440 IPR015421 GO:0003824
Lele28g0855 557 Coils Coil 299 319 - -
Lele28g0855 557 SUPERFAMILY PLP-dependent transferases 153 549 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0855 Lele-ChrLele28 5505337 5518128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0855 82 409 Acyl Lipid Metabolism Gene Families AT4G36480 77.134 0.0 552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0862 25 5528986 5534134 Lele28g0855 28 5505337 5518128 hybridization
Lele26g0875 26 5593252 5605142 Lele28g0855 28 5505337 5518128 hybridization