Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0862 ATGGAATCAGCTGTCAAGAATATTCTAAACACTACGTTAGAATGGATAACATTGGCTTTAGATGCTCCTTCTGCACGAGCTGTAGTTTTTGGAGTGCATATTGGCGGACATTTGTTTGTTGAAGTTGTTCTCCTGGTGGTCATTCTTTTCCTGCTCTCCCAGAAAAGTTACAAGCCTCCTAAACGGCCCTTGAGAGAAAAGGAAATAGATGAGCTATGTGATGAATGGGTTCCAGAACCCCTGATTCCTCCACTTAGTAAAGAGATGCAGTATGAACCCCCAGTGCTGGAGAGTGCTGCTGGGCCACATACCATAGTTAATGGTAGAGAAGTTATTAACTTTACTTCAGCAAACTATCTTGGATTGATAGGTCACAAGAAGCTACTTGAGTCATGTTCTTCTGCTTTAGGGAAATATGGTGTTGGTTCTTGTGGTCCTCGTGGATTCTATGGAACAATTGATGTGCACCTAGACTGTGAAGGCAGAATAGCAAAATTTCTGGGAACCCCTGATTCAATTCTGTACTCTTATGGATTTTCCACCATGTTTAGTGCGATTCCTGCTTTTTCTAAAAAAGGAGATATAATTGTTGTTGATGAGGGAGTCCATTGGGGGATACAGAATGGCCTTTATCTTTCAAGAAGTACAGTGGTGTATTTTAAGCACAATGACATGGACTCTTTGAGAGAAACTCTGGAGAAAATTACTGCAGGAAATAAGCGGGCCAAGAAAGTGAGGCGGTACATTGTTGTTGAAGCTGTCTACCAGAATTCTGGTCAAATTGTCCCCTTGGATGAGATTATTAGATTGAAAGAGATATACCGTTTTCGTGTTCTGGTGGATGAGAGCAACTCAATTGGTGTGCTTGGGAGTTCAGGAAGAGGCCTCACTGAACATTTTGGAGTTTCGGTTGAGAAATTAGACATCATAACTGCTGCTATGGGACATGCACTGGCCACAGAAGGAGGATTTTGCACAGGAAATGCTAGAGTTATAGATCACCAACGACTGAGTAGCTCTGGCTATGTCTTTTCTGCTTCTCTGCCCCCATATCTTGCTAGCGCTGCAATTTCAGCTATTGACATCCTAGAGGAAAATCCCAGTCTGATAACGAAGCTGAAGGCTAATATTTCTTTGCTATGGAAAGGATTATCAAACATGCAAGGCTTGATGATAGCAAGCAACCCAGAATCACCAATTGTTTATTTGAGATTGAAAAAGTCAACAGGTTCTATGAAAAATGACCTACATCTGCTCGAAGATATAGCTGAGCGTGTTTTAGAGGAAGATTCTGTGTTTGTCGTTGCTTCCAAAAGATCAACTTTGGACAAATGCCGTTTGCCGGTAGGAATCAGACTTTTTGTTTCAGCAGACCACTCAGAGTCAGATCTCCGTAAGGCAGCTGAATCATTGAAGAGGGTTGCAGCATTAGTCCTGAGTCGCTATGCTTGA 1452 0.4215 MESAVKNILNTTLEWITLALDAPSARAVVFGVHIGGHLFVEVVLLVVILFLLSQKSYKPPKRPLREKEIDELCDEWVPEPLIPPLSKEMQYEPPVLESAAGPHTIVNGREVINFTSANYLGLIGHKKLLESCSSALGKYGVGSCGPRGFYGTIDVHLDCEGRIAKFLGTPDSILYSYGFSTMFSAIPAFSKKGDIIVVDEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRETLEKITAGNKRAKKVRRYIVVEAVYQNSGQIVPLDEIIRLKEIYRFRVLVDESNSIGVLGSSGRGLTEHFGVSVEKLDIITAAMGHALATEGGFCTGNARVIDHQRLSSSGYVFSASLPPYLASAAISAIDILEENPSLITKLKANISLLWKGLSNMQGLMIASNPESPIVYLRLKKSTGSMKNDLHLLEDIAERVLEEDSVFVVASKRSTLDKCRLPVGIRLFVSADHSESDLRKAAESLKRVAALVLSRYA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0862 483 SUPERFAMILY PLP-dependent transferases 79 475 IPR015424 -
Lele25g0862 483 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 36 474 - -
Lele25g0862 483 Pfam Aminotransferase class I and II 110 471 IPR004839 GO:0009058|GO:0030170
Lele25g0862 483 Gene3D Aspartate Aminotransferase, domain 1 104 469 IPR015422 GO:0003824
Lele25g0862 483 Gene3D - 125 366 IPR015421 GO:0003824
Lele25g0862 483 FunFam serine palmitoyltransferase 1 isoform X1 125 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0862 Lele-ChrLele25 5528986 5534134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0862 1 335 Acyl Lipid Metabolism Gene Families AT4G36480 75.821 0.0 551
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0862 25 5528986 5534134 Lele27g1216 27 19149297 19154401 hybridization
Lele25g0862 25 5528986 5534134 Lele28g0855 28 5505337 5518128 hybridization