Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0875 ATGCGGAACCGGATACACCATTATAGCCGGTACGCCATCATTGTCACTATGGTTTCACAGTTTATCTCAATTACTCTGTTTCAACACTCAGAAACAGAGTCGAACTCGATTGAACCAGATTTGGATCTCATGTCAGGTTTTGCGATCGATGATGCAGAGATGGAATCAATCTCAACGATCGATCTTGGCACTGAAGCTATCTTTGTCGCGAATGGTCCAGGACCTATTGACCGTTACGCAGCAAGAATGATTGCTTCAAAAGAAAATCCAGCCTCTATGGTGCATCCAGCTGAAATTGGAGCGGGATTTTCCGAGTACGACTCGCTCGTCCATGCCGATCTTGCAAAGATTCTGGATAGATTTTTACACAACATGCGCATCATGATGGTTGCAAAATGCTTCATTTCATTGGTATCATTTATGTTTCGTCTCGTGGATCAACAGACTGCGGGTCTTCCGTTTTTCAGCCTTGCAACTTTAGCTGTCAAGAATTTTCTAAACATTACGTTAGAATGGATGACATTGGCTTTAGATGCTCCTTCTGCACGAGCTGTAGTTTTTGGAGTGCATATTGGCGGACATTTATTTGTTGAAGTTGTTCTCCTGGTGGTCATTCTTTTCCTGCTCTCCCAGAAAAGTTACAAGCCTCCTAAACGGCCCTTGAGAGAAAAGGAAATAGATGAGCTATGTGATGAATGGGTTCCAGAACCCCTGATTCCTCCACTTAGTAAAGAGATGCAGTATGAACCACCAGTGCTCGAGAGTGCTTCTGGGCCACATACCATAGTTAATGGTAGAGAAGTCATTAACTTTACTTCAGCAAACTATCTTGGATTGATAGGTCACAAGAAGCTACTTGAGTCATGTTCTTCTGCTTTAGGGAAATATGGTGTTGGTTCTTGTGGTCCTCGTGGATTCTATGGAACAATTGATGTCCACTTGGATTGTGAAGCCAGAATAGCCAAATTTCTGGGAACCCCTGATTCAATCTTGTACTCTTATGGATTTTCCACCATGTTTAGTGCGATTCCTGCTTTTTCTAAAAAAGGAGATATAATTGTTGTTGATGAGGGAGTCCATTGGGGGATACAAAATGGCCTTTATCTTTCAAGAAGCACAGTGGTGTATTTTAAGCACAATGACATGGACTCTTTGAGAGAAACTCTGGAGAAAATTACTACAGAAAATAAGCGGGCCAAGAGAGTGAGGCGGTACATTGTTGTTGAAGCTGTCTACCAGAATTCTGGTCAAATTGCCGCCTTGGATGAGATTATTAGATTGAAAGAGAAATATCATTTTCGTGTTTTGGTGGATGAGAGCAACTCAATCGGTGTGCTTGGAAGTTCAGGAAGAGGCCTCACTGAACATTTTGGAGTTCCGGTTGAGAAGTTAGATATCATAACTGCTGCTATGGGACATGCACTGGCCACAGAAGGAGGATTTTGCACGGGAAATGCTAGAGTTATAGATCACCAACGATTGAGTAGCTCTGGCTATGTCTTTTCTGCTTCTCTGCCCCCATATCTTGCTAGCGCTGCAATTTCCGCCATTGACATCCTAGAGGAAAATCCCAATCTGATAACAAAGCTGAAGGCCAATATTGCTTTACTATGGAAAGGATTATCAAACATGCAAGGCTTGATGATAGCAAGCAACCCAGGATCACCGATTGTTTATTTGAGATTGGAGAAGTCAACGGGTTCTATGAAAAATGACCTACGTCTGCTCGAAGATATAGCTGAGCGGGTTTTGGAGGAAGATTCTGTCTTTATCGTTGCTTCCAAAAGATCAACTTTGGACAAATGCCGTTTGCCGGTAGGAATCAGACTTTTTGTTTCTGCCGAACACTCAGAGTCAGATCTCCGTAAGGCAGCTGAATCATTGAAGAGGGTTGCAGCATTAGTCCTGAGTCGCCATGCTTGA 1923 0.429 MRNRIHHYSRYAIIVTMVSQFISITLFQHSETESNSIEPDLDLMSGFAIDDAEMESISTIDLGTEAIFVANGPGPIDRYAARMIASKENPASMVHPAEIGAGFSEYDSLVHADLAKILDRFLHNMRIMMVAKCFISLVSFMFRLVDQQTAGLPFFSLATLAVKNFLNITLEWMTLALDAPSARAVVFGVHIGGHLFVEVVLLVVILFLLSQKSYKPPKRPLREKEIDELCDEWVPEPLIPPLSKEMQYEPPVLESASGPHTIVNGREVINFTSANYLGLIGHKKLLESCSSALGKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGFSTMFSAIPAFSKKGDIIVVDEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRETLEKITTENKRAKRVRRYIVVEAVYQNSGQIAALDEIIRLKEKYHFRVLVDESNSIGVLGSSGRGLTEHFGVPVEKLDIITAAMGHALATEGGFCTGNARVIDHQRLSSSGYVFSASLPPYLASAAISAIDILEENPNLITKLKANIALLWKGLSNMQGLMIASNPGSPIVYLRLEKSTGSMKNDLRLLEDIAERVLEEDSVFIVASKRSTLDKCRLPVGIRLFVSAEHSESDLRKAAESLKRVAALVLSRHA 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0875 640 Coils Coil 382 402 - -
Lele26g0875 640 FunFam serine palmitoyltransferase 1 isoform X1 282 523 - -
Lele26g0875 640 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 193 631 - -
Lele26g0875 640 Gene3D Aspartate Aminotransferase, domain 1 261 626 IPR015422 GO:0003824
Lele26g0875 640 Pfam Aminotransferase class I and II 267 628 IPR004839 GO:0009058|GO:0030170
Lele26g0875 640 Gene3D - 282 523 IPR015421 GO:0003824
Lele26g0875 640 SUPERFAMILY PLP-dependent transferases 236 632 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0875 Lele-ChrLele26 5593252 5605142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0875 165 492 Acyl Lipid Metabolism Gene Families AT4G36480 77.134 0.0 554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0875 26 5593252 5605142 Lele27g1216 27 19149297 19154401 hybridization
Lele26g0875 26 5593252 5605142 Lele28g0855 28 5505337 5518128 hybridization