Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0833 ATGAAGCTGGTCTTTGCAACTCTCCTGCTGACCTGCCTCGTTCTGAGTTCCTCTTTCATTGAGGTCACAATGGCTGGCTCACCGTTCTGCGACTCCAAGTGCGGGAAAAGATGTTCGAAAGCGGGAAGGCAGGATAGATGTTTGAGGTTCTGTGGGATCTGCTGCGAAAAGTGCAAATGCGTGCCTTCTGGGACTTATGGCAACAAGCATGAGTGTCCTTGCTACAGAGATCTCAAGAACTCCAAGGGCAAGCCCAAATGCCCGTGA 267 0.5131 MKLVFATLLLTCLVLSSSFIEVTMAGSPFCDSKCGKRCSKAGRQDRCLRFCGICCEKCKCVPSGTYGNKHECPCYRDLKNSKGKPKCP 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0833 88 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 7 88 - -
Lele28g0833 88 Pfam Gibberellin regulated protein 29 88 IPR003854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0833 Lele-ChrLele28 5362466 5362829 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0828 01 4787112 4787594 Lele28g0833 28 5362466 5362829 CCT
Lele02g0802 02 4892133 4892621 Lele28g0833 28 5362466 5362829 CCT
Lele03g0817 03 4791800 4792282 Lele28g0833 28 5362466 5362829 CCT
Lele04g0821 04 5034176 5034658 Lele28g0833 28 5362466 5362829 CCT
Lele25g0836 25 5379129 5379513 Lele28g0833 28 5362466 5362829 hybridization
Lele26g0848 26 5452699 5453063 Lele28g0833 28 5362466 5362829 hybridization