Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0836 ATGAAGCTGCCCTTAGCAACTCTCCTGCTGGCTTCCCTTGTTATGAGCTCCTCTTTCATTGAGGTCACAATGGCTGGTTCACCGTTCTGCGATTCCAAGTGTGGGCAAAGATGTTCGAAAGCAGGAAGGCAGGATAGGTGTTTGAGGTTCTGTGGGATCTGCTGTGAAAAGTGCAAGTGCGTTCCTTCTGGGACTTATGGCAACAAGCATGAGTGTCCTTGCTACAGGGATCTCAAGAACTCCAAGGGCAAGCCCAAATGCCCTTGA 267 0.5019 MKLPLATLLLASLVMSSSFIEVTMAGSPFCDSKCGQRCSKAGRQDRCLRFCGICCEKCKCVPSGTYGNKHECPCYRDLKNSKGKPKCP 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0836 88 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 8 88 - -
Lele25g0836 88 Pfam Gibberellin regulated protein 29 88 IPR003854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0836 Lele-ChrLele25 5379129 5379513 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0836 25 5379129 5379513 Lele02g0794 02 4849063 4849434 CCT
Lele25g0836 25 5379129 5379513 Lele03g0811 03 4763896 4766892 CCT
Lele01g0828 01 4787112 4787594 Lele25g0836 25 5379129 5379513 CCT
Lele02g0802 02 4892133 4892621 Lele25g0836 25 5379129 5379513 CCT
Lele03g0817 03 4791800 4792282 Lele25g0836 25 5379129 5379513 CCT
Lele04g0821 04 5034176 5034658 Lele25g0836 25 5379129 5379513 CCT
Lele25g0836 25 5379129 5379513 Lele27g1242 27 19308608 19308982 hybridization
Lele25g0836 25 5379129 5379513 Lele28g0833 28 5362466 5362829 hybridization