Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0817 ATGAGCGACTCGGAAATCACCAACTCAGCTCCCGCTCCGGAGCAAGACTCCATTGCACTACCGCCCACAGAGGCTCAGCCGCAGGGCAATCTTGACAAACCCGGTGGAATCTCATTCAGCATATGGCCTCCCACCCAGCGCACCCGTGATGCTGTCGTCAATCGACTAATTGAAACCCTCTCTACGCCCTCTGTACTATCCAAGCGCTACGGCACTATGCTTCCTGACGAGGCCTCTTCCGTCGGCCGCCAGATCGAGGAGGAGGCTTTCACCGCCGCTGGTGGTTCTGCTTCCGCTGAGGACGACGGCATCGAGATCCTCCAAGTCTATTCCAAGGAGATCAGCAAGCGGATGCTCGACACTGTTAAGGCCAGATCCACTTCTGCCTCTCCTGTCGACAATTCTGCCTCTCAGACCGCCTCCTCCGAAGTTCCTCCTTCGCCAGCAAACGAAGCGACCTCCGTGGCTGAGTCCGATTCGTGA 483 0.5776 MSDSEITNSAPAPEQDSIALPPTEAQPQGNLDKPGGISFSIWPPTQRTRDAVVNRLIETLSTPSVLSKRYGTMLPDEASSVGRQIEEEAFTAAGGSASAEDDGIEILQVYSKEISKRMLDTVKARSTSASPVDNSASQTASSEVPPSPANEATSVAESDS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0817 160 MobiDBLite consensus disorder prediction 1 43 - -
Lele03g0817 160 MobiDBLite consensus disorder prediction 121 160 - -
Lele03g0817 160 Pfam WPP domain 38 129 IPR025265 -
Lele03g0817 160 Gene3D WPP domain 38 134 IPR038214 -
Lele03g0817 160 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 1 154 IPR044692 GO:0000278|GO:0048527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0817 Lele-ChrLele03 4791800 4792282 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0817 03 4791800 4792282 Lele25g0836 25 5379129 5379513 CCT
Lele03g0817 03 4791800 4792282 Lele26g0848 26 5452699 5453063 CCT
Lele03g0817 03 4791800 4792282 Lele27g1242 27 19308608 19308982 CCT
Lele03g0817 03 4791800 4792282 Lele28g0833 28 5362466 5362829 CCT
Lele03g0817 03 4791800 4792282 Lele03g0817 03 4791800 4792282 ECH
Lele01g0828 01 4787112 4787594 Lele03g0817 03 4791800 4792282 hybridization
Lele02g0802 02 4892133 4892621 Lele03g0817 03 4791800 4792282 hybridization