Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0823 ATGAAGAACTCCGGCTACCACTCCGTCTCCAGGTCCCCTGCCAAGTCTTCTTCAATGGATCACAAAATTTGGAGCAAGTTGCCGCCTGAACTCCTCGAGCTTATCCTCTCTTTCCTCCCACTCAAAACCTTCTTGAATCTGAGATCCACTTGCAAGTCCTTCAGGTCCCTCATTTATTCTCCTTCCTTCATCACCAAGCACTCTTCATCATCATCATCTTCTTCTTCTCCACCGTTCTGGTCGTTCTTATTGTTGTCTCATCCCCAATTTCACCGTCAATTCCCTCTCTACGACTGTGTACTTGGCACCTGGCGCGACATCTCTCTCTCCTTCTCCGATTTATTTCACATCTCTGCTCACTCTTCTCTAGTCTCTTCCTCCGGTGGCCTCTTCTGTTTGTCTGATTTTAATTCATCTTCCTTGCTTGTTTGCAACCTCTTGGCCAAATCCTCCAGAAAGATCGATCTTCCAACCTACTCTTATCGTATGGAGCAGCTTACTCTTGTCTCTACTGCAATCGGCTACAAGATATTCGTGCTCTCTTCTGAATCAGCCTCAAATAGCGTCTTCGTCTATGACTCCGTCGCACTTTTTTGGGAACGATTTGATTGTTCTGATTTGATTCTGAGCGACAACTATCACCAGCAAGGCGTGTTCTACAATGGCGGATTGTACTTCACGACTCCAGAACCATTTTCCGTGGTTCGCTTTGATTTTGGGAGCGGAAAATGGAAGAGGCCCAATAGTTCACTACCGGGCCAACTCTCGTTTGTTCGATTGGTGAGTGACGGAGAGAAAATGCTATATCTGGTTGGTGGTATAGGAAACAATGGAATCTCAAGGAGCATAAAGATATGGGAAATGAACGAATTGGGGAACTGGGTGGAAGTAGAGACGTTGCCGGAGTTGATGTGCAGGAAATTTGTGTCGGTATGTTATCACAATTACGAGCATATTTATTGCTTTTGGCATCACGGAATGATCTGCATTTGCTGCTATACATGGCCTGAGATTTTGTATTTCAAAGTTTCAAGGAGGACTTGGCATTGGCTTCCCAGGTGCACCTCTTTGCCCGATAAATGGAGTTGTGGGTTTAAGTGGTTCTCTTTTGTTCCTAAGCTATATGCTCTTGTCTGA 1137 0.4529 MKNSGYHSVSRSPAKSSSMDHKIWSKLPPELLELILSFLPLKTFLNLRSTCKSFRSLIYSPSFITKHSSSSSSSSSPPFWSFLLLSHPQFHRQFPLYDCVLGTWRDISLSFSDLFHISAHSSLVSSSGGLFCLSDFNSSSLLVCNLLAKSSRKIDLPTYSYRMEQLTLVSTAIGYKIFVLSSESASNSVFVYDSVALFWERFDCSDLILSDNYHQQGVFYNGGLYFTTPEPFSVVRFDFGSGKWKRPNSSLPGQLSFVRLVSDGEKMLYLVGGIGNNGISRSIKIWEMNELGNWVEVETLPELMCRKFVSVCYHNYEHIYCFWHHGMICICCYTWPEILYFKVSRRTWHWLPRCTSLPDKWSCGFKWFSFVPKLYALV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0823 378 SUPERFAMILY Kelch motif 89 355 IPR015915 GO:0005515
Lele28g0823 378 PANTHER BNACNNG10540D PROTEIN 10 376 - -
Lele28g0823 378 FunFam F-box family protein 86 365 - -
Lele28g0823 378 SUPERFAMILY F-box domain 22 326 IPR036047 GO:0005515
Lele28g0823 378 Gene3D - 20 66 - -
Lele28g0823 378 ProSiteProfiles F-box domain profile. 21 67 IPR001810 GO:0005515
Lele28g0823 378 SMART fbox_2 27 67 IPR001810 GO:0005515
Lele28g0823 378 Gene3D - 86 376 IPR015915 GO:0005515
Lele28g0823 378 Pfam F-box domain 24 63 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0823 Lele-ChrLele28 5306736 5307872 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0794 02 4849063 4849434 Lele28g0823 28 5306736 5307872 CCT
Lele03g0811 03 4763896 4766892 Lele28g0823 28 5306736 5307872 CCT
Lele25g0826 25 5321334 5322467 Lele28g0823 28 5306736 5307872 hybridization
Lele26g0836 26 5397517 5398653 Lele28g0823 28 5306736 5307872 hybridization