Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0826 ATGAAGAACTCCTGCAACCACGTCGCCGTCGCCAGGTCCCCTGCCAAGTCTTCTTCAATGGATCACAAAATTTGGAGCAGGTTGCCGCCCGAACTGCTCGAGCTTATCCTCTCTTTACTCCCACTCAAAACCTTCTTGAATCTGAGATCCACTTGCAAGGCCTTTAGGTCTCTCATTTATTCTCCCCCCTTCATCACCAGGCACTCATCATCTTCTTCTTCTTCTCCACCTTTCTCGTCGTTTTTCTTGTTGTCACATCCCCAATTTCACCGTCAATTCCCTCTCTACGACTGTGTGCTTGGCACCTGGCGCGACGTCTCTCTCTCTTTCTCTGATTTATTTCATATCTATGCGCACTCTTCTCTAGTCTCTTCCTCCGGTGGCCTCTTCTGTTTGTCCGACTTCAATTCATCTTCCTTGCTTGTTTGCAACCTCTTGGTCAAATCCTCCAGAAAGATCGATCTTCCAACCCACTCTTACCGTTTGGAGCATCTTACTCTTGTCTCTACTGCTATAGGGTACAAGATATTCGTGCTCTCCTCTGAATCAGCCTCAAATAGTGCCTTCGTTTATGATTCCGTTGCGCTTTGTTGGGAAAGATTTGATTGTTCTGATTTGATTCTGAGCGACAACTATCACCAGCAAGGTGTCTTCTACCATGGCGGCTTGTACTTTACGACTCCAGAACCATTTTCAGTGGTTGGGTTTGATTTTGGGAGCGGAAAATGGAAGAGCCCCGATAGTTCACTACCGAGCCAACTCTCGTTTGTTCGATTGGTGAGTGACGGAGAGAAAATGCTATATCTTGTCGGTGGTATAGGAAACAATGGAATCTCAAGGAGCGTAAAGATTTGGGAAATGAGTGAATCGGGGAATTGGGTGAAAGTAGAGACGTTGCCGGAGTTGATGTGCAGAAAATTTGTGTCGGTATGTTATCACAATTACGAGCATATTTATTGCTTCTGGCATCATGGAATGATCTGCATTTGCTGCTATACATGGCCTGAGATCTTGTATTTCAAAGTTTCAAGGAGGACTTGGCATTGGCTTCCCAGATGCACCTCTTTGCCTGAGAAATGGAGCTGTGGGTTTAAGTGGTTCTCTTTTGTTCCTAAGCTATATGCTCTTGTATGA 1134 0.455 MKNSCNHVAVARSPAKSSSMDHKIWSRLPPELLELILSLLPLKTFLNLRSTCKAFRSLIYSPPFITRHSSSSSSSPPFSSFFLLSHPQFHRQFPLYDCVLGTWRDVSLSFSDLFHIYAHSSLVSSSGGLFCLSDFNSSSLLVCNLLVKSSRKIDLPTHSYRLEHLTLVSTAIGYKIFVLSSESASNSAFVYDSVALCWERFDCSDLILSDNYHQQGVFYHGGLYFTTPEPFSVVGFDFGSGKWKSPDSSLPSQLSFVRLVSDGEKMLYLVGGIGNNGISRSVKIWEMSESGNWVKVETLPELMCRKFVSVCYHNYEHIYCFWHHGMICICCYTWPEILYFKVSRRTWHWLPRCTSLPEKWSCGFKWFSFVPKLYALV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0826 377 Gene3D - 11 64 - -
Lele25g0826 377 Gene3D - 149 375 IPR015915 GO:0005515
Lele25g0826 377 ProSiteProfiles F-box domain profile. 22 68 IPR001810 GO:0005515
Lele25g0826 377 SMART fbox_2 28 68 IPR001810 GO:0005515
Lele25g0826 377 Pfam F-box domain 25 63 IPR001810 GO:0005515
Lele25g0826 377 PANTHER BNACNNG10540D PROTEIN 3 375 - -
Lele25g0826 377 SUPERFAMILY F-box domain 23 330 IPR036047 GO:0005515
Lele25g0826 377 FunFam F-box family protein 85 364 - -
Lele25g0826 377 SUPERFAMILY Kelch motif 86 355 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0826 Lele-ChrLele25 5321334 5322467 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0794 02 4849063 4849434 Lele25g0826 25 5321334 5322467 CCT
Lele03g0811 03 4763896 4766892 Lele25g0826 25 5321334 5322467 CCT
Lele25g0826 25 5321334 5322467 Lele27g1252 27 19364362 19365498 hybridization
Lele25g0826 25 5321334 5322467 Lele28g0823 28 5306736 5307872 hybridization