Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0836 ATGAAGAACTCCGGCTACCACTCCGTCGCCAGGTCCCCTGCCAAGTCTTCTTCAATGGATCACAAAATTTGGAGCAGGTTGCCGCCTGAACTCCTCGAGCTTATCCTCTCTTTCCTCCCTCTCAAAACCTTCTTGAATCTGAGATCCACTTGCAAGTCCTTCAGGTCTCTCATTTATTCTCCTTCCTTCATCACCAAGCACTCCTCATCATCATCATCTTCTTCTTCTCCACCGTTCTCGTCGTTCTTCTTGTTGTCTCATCCCCAATTTCACCGTCAATTCCCTCTCTACGACTGTGTGCTTGGCACCTGGCGCGACATCTCTCTCTCCTTCTCCGATTTATTTCACATCTCTGCTCACTCTTCTCTAGTCTCTTCCTCCGGTGGCCTCTTCTGTTTGTCTGACTTTAATTCATCTTCCTTGCTTGTTTGCAACCTCTTGGCCAAATCCTCCAGACAGATCGATCTTCCAACCTACTCTTATCGTCTGGAGCAGCTTACTTTTGTCTCTACTGCAATCGGCTACAAGATATTCGTGCTCTCTTCTGAATCAGCCTCAAATAGTGCCTTCGTCTATGACTCCGTCGCACTTTGTTGGGAACGATTTGATTGTTCTGATTTGATTCTGAGCGACAACTATCACCAGCAAGGCGTGTTCTACAATGGAGGCTTGTACTTCACGACTCCAGAACCATTTTCAGTGGTCCGCTTTGATTTTGGGAGCGGAAAATGGAAGAGGCCTAATAGTTCACTACCGAGCCAGCTCTCGTTTGTTCGATTGGTGAGTGACGGAGAGAAAATGCTATATCTGGTTGGTGGTATAGGAAACAATGGAATCTCAAGGAGCATAAAGATATGGGAAATGAATGAATTGGGGAATTGGGTGGAAGTAGAGACGTTGCCGGAATTGATGTGCAGGAAATTTGTGTCGGTATGTTATCACAATTACGAGCATATTTATTGCTTTTGGCATCACGGAATGATCTGCATTTGCTGCTATACATGGCCTGAGATTTTGTATTTCAAAGTTTCAAGGAGGACTTGGCATTGGCTTCCCAGGTGCATCTCTTTGCCCGATAAATGGAGTTGTGGGTTTAAGTGGTTTTCTTTTGTTCCTAAGCTATATGCTCTTGTCTGA 1137 0.4538 MKNSGYHSVARSPAKSSSMDHKIWSRLPPELLELILSFLPLKTFLNLRSTCKSFRSLIYSPSFITKHSSSSSSSSSPPFSSFFLLSHPQFHRQFPLYDCVLGTWRDISLSFSDLFHISAHSSLVSSSGGLFCLSDFNSSSLLVCNLLAKSSRQIDLPTYSYRLEQLTFVSTAIGYKIFVLSSESASNSAFVYDSVALCWERFDCSDLILSDNYHQQGVFYNGGLYFTTPEPFSVVRFDFGSGKWKRPNSSLPSQLSFVRLVSDGEKMLYLVGGIGNNGISRSIKIWEMNELGNWVEVETLPELMCRKFVSVCYHNYEHIYCFWHHGMICICCYTWPEILYFKVSRRTWHWLPRCISLPDKWSCGFKWFSFVPKLYALV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0836 378 SUPERFAMILY F-box domain 22 331 IPR036047 GO:0005515
Lele26g0836 378 SUPERFAMILY Kelch motif 87 355 IPR015915 GO:0005515
Lele26g0836 378 Pfam F-box domain 24 63 IPR001810 GO:0005515
Lele26g0836 378 Gene3D - 87 375 IPR015915 GO:0005515
Lele26g0836 378 Gene3D - 20 66 - -
Lele26g0836 378 PANTHER BNACNNG10540D PROTEIN 11 376 - -
Lele26g0836 378 SMART fbox_2 27 67 IPR001810 GO:0005515
Lele26g0836 378 ProSiteProfiles F-box domain profile. 21 67 IPR001810 GO:0005515
Lele26g0836 378 FunFam F-box family protein 86 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0836 Lele-ChrLele26 5397517 5398653 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0794 02 4849063 4849434 Lele26g0836 26 5397517 5398653 CCT
Lele03g0811 03 4763896 4766892 Lele26g0836 26 5397517 5398653 CCT
Lele26g0836 26 5397517 5398653 Lele27g1252 27 19364362 19365498 hybridization
Lele26g0836 26 5397517 5398653 Lele28g0823 28 5306736 5307872 hybridization