Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0652 ATGGAGCCGGACATGAGCATTGAGAGCTTGTCGAGGATCCAGGTGGCGGTACTGCCAATAGGGACGGTGCCGTCGAATATGCTACGGGACTATTATTCTATGCTGCTTCCTCTATACACGATACCTCTTTCGGCAATCAGCTCCTTCTACACAAAGCACCAGAAATCACCGTTCGCTCATCAGCCATGGGACTCGGGGTTCCTCCAGTTTAAATTTGTTCTGGGAGGGGCACAACCGAGCCCATGGGAGGACTTCCAGTCTCATCATAAGACCCTGGCGGTCATAGGCATTTGCCATTGCCCTTCCTCGCCCGATCTTGATTCTGTCATCGAACAATTTTCTAATCCCTGCAAGTCTTACCCTTCATCGCTTGTCGATCGCTGCTTTGCATTTTGCCCAGATGATTCGCAGCTTGAGGATGGAGGTAAAAAGGGAGGTAATTTAAGGTTGTTTCCCCCCGCTGATCGTCAAACACTGGAGTTCCACTTGAACACTATGATGCAAGAAGTTGCTGCCTCGTTATTGATGGAATTTGAAAAGTGGGTGCTTCAGGTCGAATCTTCAGGCACCATACTCAAGACCCCTTTGGATTCTCAAGCGAGTCTCAGCTCAGAGGAGGTCATCAAGGCTAAAAAACGAAGGCTTGGGCGTGCACAGAAGACTATAGGTGATTATTGCTTGCTGGCCGGATCGCCAGTTGATGCAAATGCCCATTATTCTACTGCATTGGAACTTGCCAGGCTGACCGGAGATTACTTCTGGTATGCCGGCGCACAGGAGGGGAGCGTTTGTGCCTTGCTGATTGATCGCATGGGCCAGAAAGATTCAATCTTGGAGGAGGAAGTTAGATACCGTTACAACAGCGTAATCTTGAATTACAAGAAGTCTCAAGATAATGCTCAGAGAGTCTCTCCCCTAAGTTTTGAAGTTGAAGCTACTTTGAAATTGGCAAGGTTTCTTTGCAGGAGAGAACTGGCGAAGGAGGTGACAGAGTTGTTGACCAATGCTGCAGATGGCGCTAAATCTTTAATAGATGCTAGTGATAGACTCATATTGTTTGTTGAAATAGCTCGTTTATATGGCAGTCTTGGTTACGAGAGAAAAGCTGCTTTTTTTACTAGGCAGGTTGCTCAATTATATCTGCAGCAAGATAATCGGTTGGCTGCAATTAGCGCTTTGCAAGTTTTGGCACTGACCACTAAAGCTTATCATGTTCAAAGTCGAGCATCAGTATTTGAGAATTCTGTACCGAACAAGGCAATCGGATCAAGTAATGCAGATAGTGGGAAAAAATACCCCCAATCAGCAGTCTCACTATTTGAGTCTCAGTGGAGCACCCTTCAGATGGTGGTATTAAGAGAAATTCTGCTTTCTGCTGTTCGTGCTGGAGATCCTCTAGCTGCATGGAGTGCTTCAGCAAGACTACTCAGATCTTATTATCCTCTAATTACTCCTGTTGGGCAAAATGGCCTAGCTAATGCACTTAAAAATTCAGCTGAAAGGCTGCCACCAGGGACTCGTTGTGCTGATCCTGCCTTACCTTTTATAAGGTTGCATTCTTTTCCTCTCCATCCAACACAAATGGACATTGTAAAACGCAACACAGCTAGGGAAGACTGGTGGGCAGGTTCTGCTCCTTCAGGCCCTTTCATTTATACACCATTTAGCAAAGGAGAGTCCAATAATGTTAAGAAGCAGGAGCTTATTTGGATTGTTGGAGAGCCTGTTCAAGTCTTGGTGGAATTGGCAAATCCATGTGGCTTTGATTTGAAGGTTGATAGCATCTATTTGTCTGTGCATTCAGGAAATTTTGATGCTTTCCCTGTGAGCGTAAGCCTTCCACCTAATTCGTCAAAAGTGATCACCTTATCGGGAATCCCAACATCTGTGGGAGTAGTTACAGTTCCTGGGTGCATTGTTCATTGTTTTGGTGTTGTTACTGAACACCTGTTTAAAGATGTTGACAATCTGCTTCTTGGAGCAGCGCAAGGACTTGTCCTCTCTGATCCTTTCCGCTGCTGTGGATCTCCAAAGTTAAAAAATGTGTCTGTTCCAAATATTTCTGTTGTGCCACCACTTCCATTGCTGGTGTCACGTGTTGTTGGGGGTGATGGTGCTATCATTTTGTATGAAGGTGAAATTCGTGATGTGTGGATATGTCTGGCTAATGCAGGCACAGTTCCAATTGAGCAGGCGCATATTTCATTGTCAGGAAAAAATCAAGATGCTGTGCTTTCATATTCTTTTGAAACTCTAAAGTCTTGCCTCCCCCTAAAGCCTGGAGCAGAAGTGACTTTACCAGTGACCTTGAGAGCTTGGCAGGTTGGTTTGGTGGATCCAGATACCAGTGCTGCGAAGGGTGCCTCCGGAAGCACTACGAGGCATGTTAAAGACGGAATCAGCCCATCATTATTGATACATTATGCTGGTCCTCTGCAAACCTCTGGCAATCCTCTAAGTAATGGATCTAATGTGCCCCCTGGTAGGCGCCTTCTTGTTCTTTTCCATATTTTTGTTTTGCCGGGCTTGTCTTTTGTTAAGGCTCGGCTGCTTTCAATGGAGTTTCCTGCTCATGTTGGTGAGAATCTTCCCAAGCTGGCTGATACAAATAGTAATTCCAACGGAGGGCATGTTGACTCTCAGACAAGAATGGACAGATTGGTGAGAATTGATCCTTTCAGAGGAAGTTGGGGATTGCGATTTCTTGAACTTGAGCTGTCTAACCCCACTGATGTTGTGTTTGAAATTAGTGTTACTGTCAAACTGGAGAACTCTAGTGATGAGGACAATCTTTCTGGTGATCAGGATGCCGCTGAATATGGCTATCCTAAAACAAGAATAGATAGGGATTGCTCCGCCAGGGTTCTAGTGCCTCTTGAGCATTTTAAACTACCAGTTCTTGATGATTCCTTTTTCATGAAGGATATTCGGGCAGATGGTGTTGGTGGAGGCAGGAATATGACGTTCTCAGAGAAGAACACTAAAGCTGAACTTAATGCCTGTATCAAGAACCTTGTGTCTAGGATTAAAGTTAGATGGCATTCAGGACGCAATAGCTCTGGAGAATTGAATATTAAGGATGCCATCCAGGCTGCTCTTCAAACCTCAATTATGGATGTCCTGCTGCCCGATCCATTGACCTTTGGCTTCAGGCTTGTCAGAAATGATTTTGATTCAGAAAAAGAATCCAATGTTGATGATGTGCAATCTCCTGCATCAAAAGATTCTGTGCTTGCACATGAAATGACGCAAATGGAGGTTCTTGTCCGTAATAATACAAAGGATTTGATTAAAATGAATCTTAACATTACTTGCAGGGATGTAGCCGGGGAGAATTGTGTAGATGGTGCAAAGGCAACTGTTCTATGGACGGGTGTTCTAAATGATATTACTATGGAGATCCCCCCACTTAAAGAAGGCAAACATTCTTTCTGCATGTATTTTCTTGTTCCGGGAGAGTATACCCTTGCAGCTGCAGCAGTGATCAATGATGCAAATGACATTCTCAGGACTCGAGCTAGGACCATTTCGGCTGACGAGCCAATCTTCTGTCGGGGACCACCGTATCATGTTCGTGTTCTTGGGACCGCATGA 3594 0.4496 MEPDMSIESLSRIQVAVLPIGTVPSNMLRDYYSMLLPLYTIPLSAISSFYTKHQKSPFAHQPWDSGFLQFKFVLGGAQPSPWEDFQSHHKTLAVIGICHCPSSPDLDSVIEQFSNPCKSYPSSLVDRCFAFCPDDSQLEDGGKKGGNLRLFPPADRQTLEFHLNTMMQEVAASLLMEFEKWVLQVESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYSTALELARLTGDYFWYAGAQEGSVCALLIDRMGQKDSILEEEVRYRYNSVILNYKKSQDNAQRVSPLSFEVEATLKLARFLCRRELAKEVTELLTNAADGAKSLIDASDRLILFVEIARLYGSLGYERKAAFFTRQVAQLYLQQDNRLAAISALQVLALTTKAYHVQSRASVFENSVPNKAIGSSNADSGKKYPQSAVSLFESQWSTLQMVVLREILLSAVRAGDPLAAWSASARLLRSYYPLITPVGQNGLANALKNSAERLPPGTRCADPALPFIRLHSFPLHPTQMDIVKRNTAREDWWAGSAPSGPFIYTPFSKGESNNVKKQELIWIVGEPVQVLVELANPCGFDLKVDSIYLSVHSGNFDAFPVSVSLPPNSSKVITLSGIPTSVGVVTVPGCIVHCFGVVTEHLFKDVDNLLLGAAQGLVLSDPFRCCGSPKLKNVSVPNISVVPPLPLLVSRVVGGDGAIILYEGEIRDVWICLANAGTVPIEQAHISLSGKNQDAVLSYSFETLKSCLPLKPGAEVTLPVTLRAWQVGLVDPDTSAAKGASGSTTRHVKDGISPSLLIHYAGPLQTSGNPLSNGSNVPPGRRLLVLFHIFVLPGLSFVKARLLSMEFPAHVGENLPKLADTNSNSNGGHVDSQTRMDRLVRIDPFRGSWGLRFLELELSNPTDVVFEISVTVKLENSSDEDNLSGDQDAAEYGYPKTRIDRDCSARVLVPLEHFKLPVLDDSFFMKDIRADGVGGGRNMTFSEKNTKAELNACIKNLVSRIKVRWHSGRNSSGELNIKDAIQAALQTSIMDVLLPDPLTFGFRLVRNDFDSEKESNVDDVQSPASKDSVLAHEMTQMEVLVRNNTKDLIKMNLNITCRDVAGENCVDGAKATVLWTGVLNDITMEIPPLKEGKHSFCMYFLVPGEYTLAAAAVINDANDILRTRARTISADEPIFCRGPPYHVRVLGTA 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0652 1197 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 327 741 IPR013935 -
Lele28g0652 1197 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 11 196 IPR013935 -
Lele28g0652 1197 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 274 IPR013935 -
Lele28g0652 1197 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1191 IPR013935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0652 Lele-ChrLele28 4164669 4171049 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0659 25 4144343 4151215 Lele28g0652 28 4164669 4171049 hybridization
Lele26g0668 26 4244422 4250786 Lele28g0652 28 4164669 4171049 hybridization