Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0659 ATGGAGCCGGACGTGAGCATTGAGAGCTCGTCGAGGATCCAGGTGGCGGTACTGCCGATCGGTATTGTGCCATCGGATATGCTGCGGGACTATTATTCTATGTTGCTTCCTCTACACACGATACCTCTCTCGGCAATCAGCTCCTTCTACACAGAGCATCAGAAATCACCGTTCGCTCATCAGCCATGGGACTCGGGGTTCCTCCAGTTTAAATTTGTTCTGGGAGGGGCGCAACCGAGCCCATGGGAGGACTTCCAGTCTCATCGTAAGACCCTGGCGGTCATTGGCATTTGCCACTGCCCTTCCTCACCCGATCTTGATTTTGTCGTCGAACAATTTTCTAACTCCTGCAAGTCTTACCCTTCATCACTTGTCGATCGCTGCTTTGCATTCTGCCCAGATGATTCGCAGCTTGAGGATGGAGGTAAAAAGGGCGGTACTTTAAGATTGTTTCCCCCTGCTGATCGTCAAACTCTGGAGTTCCACCTGAACACTATGATGCAAGAAGTTGCTGCCTCGTTATTGATGGAATTTGAAAAGTGGGTGCTTCAGGTCGAATCTTCAGGCACCATACTCAAGACCCCTTTGGATTCTCAAGCGAGTCTCAGCTCAGAGGAGGTTATTAAGGCTAAAAAACGAAGGCTTGGGCGTGCACAGAAGACAATAGGCGATTATTGCTTGCTGGCCGGATCGCCAGTTGATGCAAATGCCCATTATTCTACTGCATTGGAACTTGCCAGGTTGACCGGCGATTACTTCTGGTATGCCGGCGCATTGGAGGGGAGCGTTTGTGCCTTGCTGATTGATCGCATGGGCCAGAAAGATTCAATCTTGGAGGAGGAAGTTAGATACCGTTACAACAGCGTAATCTTGAATTACAAGAAGTCCCAAGATAATGCTCAGAGAGTCTCTCCCCTAAGTTTTGAACTTGAAGCTACTTTGAAATTGGCAAGGTTTCTTTGCAGGCGAGAGCTGGCGAAGGAGGTGACGGAGTTGTTGACTAATGCTGCAGATGGTGCTAAATCTTTAGTAGATGCCAGTGATAGACTCATATTGTTTGTTGAAATAGCCCGTTTATATGGCAGTCTTGGTTACGAGAGAAAGGCTGCTTTTTTTACAAGGCAGGTTGCTCAGTTATATCTGCAGCAAGATAATCAGTTGGCTGCAATTAGTGCTTTGCAAGTTTTGGCACTGACCACTAAAGCTTATCATGTTCAAAGTAGAGCATCAGTGTTTGAGAATTCTTTACCTAACAAGGGAATCGGATCAAGTAATGCAGATAGTGGGAAAAAGTATCCCCAATCAGCAGTCTCACTATTTGAATCTCAGTGGAGTACCCTTCAGATGGTGGTATTAAGAGAAATTCTGCTTTCTGCTGTTCGTGCTGGAGATCCTCTTGCTGCATGGAGTGCAGCAGCAAGACTACTCAGATCTTATTATCCTCTAATTACTCCTGTTGGCCAAAATGGCCTAGCTAGTGCACTTAAAAATTCAGCTGAAAGGCTGCCACCAGGGACTCGTTGTGCTGATCCTGCCTTACCTTTTATAAGGTTGCATTCTTTTCCTCTCCATCCAACACAAATGGACATTGTAAAACGGAACACAGCTAGGGAAGACTGGTGGGCAGGTTCTGCTCCTTCAGGCCCTTTCATTTATACACCATTTAGCAAAGGAGAGTCCAATAATGCTAAGAAGCAGGAGCTTATTTGGATTGTTGGAGAGCCTGCCCAGGTCTTGGTGGAATTGGCAAATCCATGTGGCTTTGATTTGAAGGTTGATAGCATCTATTTGTCTGTGCATTCAGGAAATTTTGATGCTTTCCCTGTGAGCGTAAGCCTGCCACCTAATTCATCAAAAGTGATCACCTTATCAGGAATCCCAACATCTATGGGAGTAGTTACAGTTCCTGGGTGCATTGTTCATTGTTTTGGTGTTGTTACTGAACACCTGTTTAAAGATGTTGACAATCTGCTTCTTGGAGCAGCGCAAGGACTTGTCCTCTCTGATCCTTTCCGCTGCTGTGGATCTCCAAAGTTAAAAAATGTGTCTCCTCCAAACATTTCTGTTGTGCCACCACTTCCATTGCTGGTGTCACGTGTTGTTGGGGGTGATGGTGCTATCATTTTGTATGAAGGTGAAATTCGTGATGTATGGATATGTCTGGCTAATGCAGGCACAGTTCCAATTGAGCAGGCACATATTTCATTGTCAGGAAGAAATCAAGATGCTGTGCTTTCATATTCTTTTGAAACTTTAAGGTCTTGCCTCCCCCTAAAGCCTGGAGCAGAAGTGACTTTACCAGTGACCTTGAGAGCTTGGCAGGTTGGTCTGGTGGATCCAGATACCAGCGCTGGGAAGGGTGCCTCCGGAAGCATTATGAGGCATGTTAAAGATGGAACCGGCCCATCATTATTGATACATTATGCGGGTCCACCGCAAACCTCTGGCAATTCTCAAAGTAATGGATCTAATGTGCCCCCTGGTAGGCGCCTTGTTGTTCCTTTGCATATTTGTGTTTTGCCAGGCTTGTATTTTGTCAAGGCTAGGCTACTTTCAATGGAGTTTCCTGCTCATGTTGGTGAGAATCTTCCCAAGCTGGCTGATACAAATAGTAATTCCAACGGAGGGTATGTTGACTCTCAGACAAAAATGGACAGATTGGTGAAAATTGATCCTTTCAGAGGAAGTTGGGGGTTGCGATTTCTTGAACTTGAGCTGTCTAACCCCACTGATGTTGTGTTTGAAATTAGTGTTACTGTCAAACTGGAGAACTCTAGCGATGAGGACAATCTTTCTGGTGATCAGGATGCCGCGGAATATGGCTATCCTAAAACGAGAATAGATAGGGATTGCTCCGCCAGGGTTCTAGTGCCTCTTGAGCATTTTAAACTACCAGTTCTTGATGATTCCTTTTTCATGAAGGATATTCAGGCAGACGGTGTTGGTGGAGGCAGGAATAGAACGTTCTCAGAGAAGAACACTAGAGCTGAACTTAATGCCTGTATCAAGAACCTTGTATCTAGGATTAAAGTTAGATGGCATTCAGGACGCAATAGCTCTGGAGAGTTGAATATTAAGGATGCCATCCAGGCTGCTCTTCAGACCTCTATTATGGATGTCCTACTGCCTGATCCATTGACCTTTGGCTTCAGGCTGGTCAGAAATGATTTTGATTCAGAAAAAGAATCCAATGTTGATGATGTGCATTCTCCTTCATCAAAAGATTCTGTGCTTGCACATGAAATGACGCCAATGGAGGTTCTTGTCCGTAATAATACAAAGGATTTGATTAAAATGAATCTGAACATTACTTGCAGAGATGTAGCTGGGGAAAATTGCGTAGATGGGGCAAAAGCAACCGTTCTGTGGACTGGTGTTCTAAATGATATTACTATGGAGATCCCCCCACTTAAAGAAGTTAAACATTCTTTCTGCATGTATTTTCTTGTTCCGGGAGAGTATACCCTTGCAGCTGCAGCCGTGATCAATGATGCAAATGACATTCTCAGGACTCGAGCTAAGACCATTTCGGCTGACGAGCCAATCTTCTGTCGGGGACCACCATATCAAGTGCGGGTTCTTGGGACCGCATGA 3594 0.453 MEPDVSIESSSRIQVAVLPIGIVPSDMLRDYYSMLLPLHTIPLSAISSFYTEHQKSPFAHQPWDSGFLQFKFVLGGAQPSPWEDFQSHRKTLAVIGICHCPSSPDLDFVVEQFSNSCKSYPSSLVDRCFAFCPDDSQLEDGGKKGGTLRLFPPADRQTLEFHLNTMMQEVAASLLMEFEKWVLQVESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYSTALELARLTGDYFWYAGALEGSVCALLIDRMGQKDSILEEEVRYRYNSVILNYKKSQDNAQRVSPLSFELEATLKLARFLCRRELAKEVTELLTNAADGAKSLVDASDRLILFVEIARLYGSLGYERKAAFFTRQVAQLYLQQDNQLAAISALQVLALTTKAYHVQSRASVFENSLPNKGIGSSNADSGKKYPQSAVSLFESQWSTLQMVVLREILLSAVRAGDPLAAWSAAARLLRSYYPLITPVGQNGLASALKNSAERLPPGTRCADPALPFIRLHSFPLHPTQMDIVKRNTAREDWWAGSAPSGPFIYTPFSKGESNNAKKQELIWIVGEPAQVLVELANPCGFDLKVDSIYLSVHSGNFDAFPVSVSLPPNSSKVITLSGIPTSMGVVTVPGCIVHCFGVVTEHLFKDVDNLLLGAAQGLVLSDPFRCCGSPKLKNVSPPNISVVPPLPLLVSRVVGGDGAIILYEGEIRDVWICLANAGTVPIEQAHISLSGRNQDAVLSYSFETLRSCLPLKPGAEVTLPVTLRAWQVGLVDPDTSAGKGASGSIMRHVKDGTGPSLLIHYAGPPQTSGNSQSNGSNVPPGRRLVVPLHICVLPGLYFVKARLLSMEFPAHVGENLPKLADTNSNSNGGYVDSQTKMDRLVKIDPFRGSWGLRFLELELSNPTDVVFEISVTVKLENSSDEDNLSGDQDAAEYGYPKTRIDRDCSARVLVPLEHFKLPVLDDSFFMKDIQADGVGGGRNRTFSEKNTRAELNACIKNLVSRIKVRWHSGRNSSGELNIKDAIQAALQTSIMDVLLPDPLTFGFRLVRNDFDSEKESNVDDVHSPSSKDSVLAHEMTPMEVLVRNNTKDLIKMNLNITCRDVAGENCVDGAKATVLWTGVLNDITMEIPPLKEVKHSFCMYFLVPGEYTLAAAAVINDANDILRTRAKTISADEPIFCRGPPYQVRVLGTA 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0659 1197 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1191 IPR013935 -
Lele25g0659 1197 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 203 278 IPR013935 -
Lele25g0659 1197 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 321 737 IPR013935 -
Lele25g0659 1197 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 9 196 IPR013935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0659 Lele-ChrLele25 4144343 4151215 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0659 25 4144343 4151215 Lele27g1428 27 20524706 20532109 hybridization
Lele25g0659 25 4144343 4151215 Lele28g0652 28 4164669 4171049 hybridization