Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0450 ATGGAGCTTCTATTTGTTTGTTTTAGGTATATGATGTTTGTATGCTGTGGCTGTCTTAAGTTCTTGCTCGTGTTGTGCTTGACGGTCATTTTCATCTTTGCTCAATTCATTGGGTTCTGGATCTGGAGTTCCACTGAACAAGTAACTCAAGTGATTCGTTATCTGACATTGATCATTGACGAACACCTCAACTCATCAATGGACAAAGTCACTAGTGATAACCATAAATTAGCTGCTTTATTCGTTCAAAAACTACATGAGGATTTAGTTCAACATCTACCAAAACGATTCCTTCCTGAGACATTTTCGTCTCTTGCCTTCGTCCTTCAATTTCCTATTATTCCTCTCTGCGATCTCGGGTTAGGGTTCGACTCAGTCTCGATGGCTGTTTCAATCAGCTTCTCTGGTGCCAAATTGGAGGCCTTGTTGCTCAAATCTTCTTCCCCTGCCTCCAGGGCCTCCGCTGCTACCCGTTTATGGGATTTTGGAAAACCCGGCGCAATTAAAAAGACCCTGATTCAGAGAGGAATAAGTCGCTGCGAGGCTGCTGTTCCTGAGGTGTTGATCAAGACCGATGATCCTGGTAATGGTAACAGCGTCTCTGCTCTTGAGCAGCTCAAGACTTCTGCTGCTGACAGATATACAAAGGAAAGGAGCAGCATTGTGGTCATTGGGCTCAGTGTGCACACTACACCTGTGGAAATGCGAGAAAAGCTTGCCATTCCAGAAGCAGAATGGCCTCAAGCCATTGGAGAGTTGTGTGGTCTGAATCATATTGAAGAAGCAGCTGTCCTGAGCACCTGCAACAGAATGGAGATATATGTTGTTGCTTTGTCCCAGCACCGTGGTGTCAAAGAGGTCACTGAATGGATGTCAAAAAAAAGTGGGGTCCCTGTTTCGGATCTTTGCCAGCATCGGTTCTTGCTTTACAACAAAGATGCTACACAGCATCTTTTTGAAGTATCTGCAGGTCTTGACTCTCTTGTATTAGGAGAAGGTCAAATCCTTGCGCAGGTTAAGCAAGTAGTTAAGGTTGGACAGGGCATTAATGGCTTTGGGAGAAACATCAGTGGGCTGTTCAAACATGCAATAACTGTGGGGAAGAGGGTTAGAACTGAAACTAATATTGCAGCTGGTGCAGTTTCTGTAAGCTCAGCTGCTGTTGAATTGGCCTTGATGAAGCTACCTGAAACCTCACATGATAAGGCCAGGATGTTGGTTATTGGAGCTGGCAAGATGGGAAAGCTTGTGATCAAACATTTGGTTGCTAAAGGCTGCAATAAGATGGTGGTTGTTAATAGAACCGAGGAGAGAGTTGCAGCGATTCATGAAGAAATCAAGGATGTTGAAATTATATATAAACCCCTTTCAGACATGTTCTCCTGTTCCGGTCAAGCAGATGTCATTTTTACAAGCACCGCATCAGAAAGCCCCTTGTTCTTGAAAGATCATGTGCAGGACCTTCCTCCCGCAAGTCAAGATGTTGGAGGGCTTCGTCTTTTTGTTGATATCTCTGTTCCTCGCAATGTAGGTTCTTGTGTCTCTGATGTTGATTCTGTGCGAGTTTACAATGTTGATGACCTTAAAGAGGTTGTGGCTGCTAATAAAGAGGATCGGCTAAGAAAAGCAATGGAGGCTCAGGCAATCATTGCCGAGGAATCAAAACAATTCGAAGCTTGGAGGGATTCTCTGGAAACTGTTCCTACCATCAAGAAATTGAGGGCTTATGCCGAAAGAATCAGGGCCGCTGAGCTTGAGAAATGCCTAAGTAAGATGGGAGATGATATTCCAAAGAAGACGAGGAGAGCTGTGGATGACCTTAGCCGGGGCATAGTGAACAAGCTGCTGCATGGTCCAATGCAACACCTGAGATGTGATGGGAGTGATAGCCGGACTCTTAGTGAGACCCTTGAGAACATGCATGCTTTGAACAGAATGTTCAGTCTTGAGTTAGAAGTATCAATTTTGGAGCAGAAGATTCGAGCCAAGGTGGAACGAAATCAGAAGTAA 2010 0.4463 MELLFVCFRYMMFVCCGCLKFLLVLCLTVIFIFAQFIGFWIWSSTEQVTQVIRYLTLIIDEHLNSSMDKVTSDNHKLAALFVQKLHEDLVQHLPKRFLPETFSSLAFVLQFPIIPLCDLGLGFDSVSMAVSISFSGAKLEALLLKSSSPASRASAATRLWDFGKPGAIKKTLIQRGISRCEAAVPEVLIKTDDPGNGNSVSALEQLKTSAADRYTKERSSIVVIGLSVHTTPVEMREKLAIPEAEWPQAIGELCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKKSGVPVSDLCQHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGINGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPETSHDKARMLVIGAGKMGKLVIKHLVAKGCNKMVVVNRTEERVAAIHEEIKDVEIIYKPLSDMFSCSGQADVIFTSTASESPLFLKDHVQDLPPASQDVGGLRLFVDISVPRNVGSCVSDVDSVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIAEESKQFEAWRDSLETVPTIKKLRAYAERIRAAELEKCLSKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLELEVSILEQKIRAKVERNQK 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0450 669 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 131 663 - -
Lele28g0450 669 CDD NAD_bind_Glutamyl_tRNA_reduct 221 543 - -
Lele28g0450 669 Pfam Shikimate / quinate 5-dehydrogenase 389 531 IPR006151 -
Lele28g0450 669 FunFam Glutamyl-tRNA reductase 379 538 - -
Lele28g0450 669 Gene3D - 380 532 - -
Lele28g0450 669 FunFam Glutamyl-tRNA reductase 220 379 - -
Lele28g0450 669 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 543 629 IPR036453 GO:0008883|GO:0033014|GO:0050661
Lele28g0450 669 ProSitePatterns Glutamyl-tRNA reductase signature. 317 340 IPR018214 GO:0008883
Lele28g0450 669 Pfam Glutamyl-tRNAGlu reductase, N-terminal domain 224 374 IPR015895 GO:0008883|GO:0033014|GO:0050661
Lele28g0450 669 TIGRFAM hemA: glutamyl-tRNA reductase 221 628 IPR000343 GO:0008883|GO:0033014|GO:0050661
Lele28g0450 669 Hamap Glutamyl-tRNA reductase [hemA]. 220 647 IPR000343 GO:0008883|GO:0033014|GO:0050661
Lele28g0450 669 Gene3D - 219 379 IPR036343 GO:0008883|GO:0033014|GO:0050661
Lele28g0450 669 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 545 649 IPR015896 GO:0008883|GO:0033014|GO:0050661
Lele28g0450 669 SUPERFAMILY Glutamyl tRNA-reductase catalytic, N-terminal domain 220 376 IPR036343 GO:0008883|GO:0033014|GO:0050661
Lele28g0450 669 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 379 539 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0450 Lele-ChrLele28 2860095 2865313 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0443 25 2779405 2781913 Lele28g0450 28 2860095 2865313 hybridization
Lele26g0456 26 2883548 2890346 Lele28g0450 28 2860095 2865313 hybridization