Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0456 ATGCTGATGTATAGAGGAGGGAAGATTTGCTTGACCGTGCACTTCAAGCCACTCTGGGCTAAAAACTGCCCTAGATTTGGCATAGCACATGCCCTTTGCCTGGGGCTTGCCCCATGGCTGGCCGCAGAGTTCTTGCTCGGGTTGTGCTTGACGGTCATGTTCATCTTTGCTCAATTCATTGGTTCTGGATCTGGAGTTCCACTAAACAATTCAAGGGACGATCTTTACTTCCTTTGGCAACAACCCTTCCACGCGTTTCTCAATCGACCCTTTCATGTCATTAGGATTTCATTCAACAACTACCAAAACGATTCCTTCCTGAGACATTTTCGTCTCTTGCCTTCGTCAATTTCCCATTATTCCTCTCTGCGATCTCGGGTTAGGGTTCGACTCAATCTCAAATTCTCAATGGCTGTTTCAACCAGCTTCTCTGGTGCCAAATTGGAGGCCTTGTTGCTCAAATATTCTTCCCCTGCCTCCAGGGCCTCCGCTGCTACCCGTTTCTCGGATTTTGGCAAAGCCGGCGCAATTAAAAAGACCCTGATTCAGAGAGGAATAATTCGCTGCGAGGCTGCTGTTCCTGAGCTGTTGATCAAGGCCGATGATCCTAGTAATGGTAACAGCGTCTCTGCTCTTGAGCAGCTCAAGACTTCTGCTGCTGACAGATATACAAAGGAAAGGAGCAGCATTGTGGTCATTGGGCTCAGTGTGCACACTACACCTGTGGAAATGCGAGAAAAGCTTGCCATTCCAGAAGCAGAATGGCCTCAAGCCATTGGGGAGCTGTGTGGTCTGAATCATATTGAAGAAGCAGCTGTCCTGAGTACCTGCAACAGAATGGAGATATATGTCGTTGCTTTGTCCCAGCACCGTGGTGTCAAAGAGGTCACTGAATGGATGTCAAAAAAAAGTGGAGTCCCTGTTTCGGATCTTTGCCAGCATCGGTTCTTGCTTTACAACAAAGATGCTACACAGCATCTTTTTGAAGTATCTGCAGGTCTTGACTCTCTTGTATTAGGAGAAGGTCAAATCCTTGCGCAGGTTAAGCAAGTAGTTAAAGTTGGACAGGGCATTAATGGCTTTGGGAGAAACATCAGTGGGCTGTTCAAACATGCAATAACTGTGGGGAAGAGGGTTAGAACTGAAACTAATATTGCTGCTGGTGCAGTTTCTGTAAGCTCAGCTGCTGTTGAATTGGCCTTGATGAAGCTACCTGAAGCCTCACATGATAAGGCCAGGATGTTGGTTATTGGAGCTGGCAAGATGGGAAAGCTTGTGATCAAACATTTGGTTGCTAAAGGCTGTACTAAGATGGTGGTTGTTAATAGAACCGAGGAGAGAGTTTCAGCGATCCGTGAAGAAATCAAGGATGTTGAAATTATATATAAACCCCTTTCAGAAATGCTCTCCTGTGCCGGTCAAGCAGATGCCATTTTTACAAGCACTGCATCAGAAAGCCCCTTGTTTTTGAAAGATCATGTGCAGGACCTTCCTCCCGCAAGTCAAGATGTTGGAGGGCTTCGTCTTTTTGTTGATATCTCTGTTCCTCGCAATGTAGGTTCTTGTGTCTCTGATGTTGATTTTGTGCGAGTTTACAATGTTGATGACCTTAAAGAGGTTGTGGCTGCTAATAAAGAGGATCGGCTAAGAAAAGCAATGGAGGCTCAGGCAATTATTGCCGAGGAATCAAAACAATTCGAAGCTTGGAGGGATTCTCTGGAAACTGTTCCTACCATCAAGAAATTGAGGGCTTATGCTGAAAGAATCAGGGCCGCTGAGCTTGAGAAATGCCTAAGTAAGATGGGAGATGATATTCCAAAGAAGACGAGGAGAGCTGTGGATGACCTTAGCCGGGGCATAGTGAACAAGCTGCTGCATGGTCCAATGCAACACCTGAGATGTGATGGGAGTGATAGCCGAACTCTTAGTGAGACCCTTGAGAACATGCATGCCTTGAATAGAATGTTCAGTCTTGAGACAGAAGTATCAATTTTGGAGCAGAAGATTCGAGCCAAGGTGGAACGAAATCAGAAGTAA 2037 0.4595 MLMYRGGKICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEFLLGLCLTVMFIFAQFIGSGSGVPLNNSRDDLYFLWQQPFHAFLNRPFHVIRISFNNYQNDSFLRHFRLLPSSISHYSSLRSRVRVRLNLKFSMAVSTSFSGAKLEALLLKYSSPASRASAATRFSDFGKAGAIKKTLIQRGIIRCEAAVPELLIKADDPSNGNSVSALEQLKTSAADRYTKERSSIVVIGLSVHTTPVEMREKLAIPEAEWPQAIGELCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKKSGVPVSDLCQHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGINGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPEASHDKARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRTEERVSAIREEIKDVEIIYKPLSEMLSCAGQADAIFTSTASESPLFLKDHVQDLPPASQDVGGLRLFVDISVPRNVGSCVSDVDFVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIAEESKQFEAWRDSLETVPTIKKLRAYAERIRAAELEKCLSKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLETEVSILEQKIRAKVERNQK 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0456 678 SUPERFAMILY UBC-like 3 43 IPR016135 -
Lele26g0456 678 FunFam Glutamyl-tRNA reductase 388 547 - -
Lele26g0456 678 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 138 672 - -
Lele26g0456 678 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 554 658 IPR015896 GO:0008883|GO:0033014|GO:0050661
Lele26g0456 678 Gene3D Ubiquitin Conjugating Enzyme 1 47 IPR016135 -
Lele26g0456 678 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 552 638 IPR036453 GO:0008883|GO:0033014|GO:0050661
Lele26g0456 678 TIGRFAM hemA: glutamyl-tRNA reductase 230 638 IPR000343 GO:0008883|GO:0033014|GO:0050661
Lele26g0456 678 Pfam Shikimate / quinate 5-dehydrogenase 398 540 IPR006151 -
Lele26g0456 678 FunFam Glutamyl-tRNA reductase 229 388 - -
Lele26g0456 678 Coils Coil 441 461 - -
Lele26g0456 678 SUPERFAMILY Glutamyl tRNA-reductase catalytic, N-terminal domain 229 385 IPR036343 GO:0008883|GO:0033014|GO:0050661
Lele26g0456 678 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 388 548 IPR036291 -
Lele26g0456 678 ProSitePatterns Glutamyl-tRNA reductase signature. 326 349 IPR018214 GO:0008883
Lele26g0456 678 Pfam Ubiquitin-fold modifier-conjugating enzyme 1 3 43 IPR014806 GO:0061657|GO:0071569
Lele26g0456 678 Hamap Glutamyl-tRNA reductase [hemA]. 229 656 IPR000343 GO:0008883|GO:0033014|GO:0050661
Lele26g0456 678 CDD NAD_bind_Glutamyl_tRNA_reduct 230 552 - -
Lele26g0456 678 Gene3D - 228 388 IPR036343 GO:0008883|GO:0033014|GO:0050661
Lele26g0456 678 Pfam Glutamyl-tRNAGlu reductase, N-terminal domain 233 383 IPR015895 GO:0008883|GO:0033014|GO:0050661
Lele26g0456 678 Gene3D - 389 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0456 Lele-ChrLele26 2883548 2890346 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0456 26 2883548 2890346 Lele27g1641 27 21930633 21933435 hybridization
Lele26g0456 26 2883548 2890346 Lele28g0450 28 2860095 2865313 hybridization