Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0203 ATGGCTGTGCAGGGAATAATTGAATATTTTGAGTTGGTGACACTGCGAGGAGGAAGAAGTTGGCAACCGAGAAAAGCAGCCTACGTGTTGTTGTTGCTGGAACAAGTGTTTCTCTCGGAGGATGTTACCCAGAAAGTGGCATCAATTATCCTCAATCTAGACCCCGGCGTTGAATTCGAGGATTATCTTTTGTTGCTGACTGTGACTGGTTCAGGTCAAGAGCAGCATGCCATCGCTATCATATATAAAAGAAGGCAGGAGTGGAGAGACTTGGAGGCGAGCAGAAGAAGAAGAAGCCGCAGTGGCGTTTGGAAGAGAATGGCAGTGACGGACTTCTTCGCCGGCGAAATCGCCACGGAACTCATGAAACTGCTCATAGACATATCTCGCAAGTCACTGCTCTGCAAATCAAGTGCGGACCAGCTCCACACCTACATCCAGCAACTCCTCCCCATCATCGAAGAAATCAAATACTCCGGCGTTGAGCTCCCCTCCTTCCGCCAATCCCAGCTCGATCGAATCTCCGAGATGCTCCGTTCTGGCGTCGAGCTTTCCCACAAGGTTATCTCCTCCAGCCGCTGGAACGTCTACAAGAATTTGCAGCTCGCCAAGAAGATGGAGAAGCTCGAGAAGAACGTCTCCAGGTTCCTTAACGGTCCCATGCAGGCTCATATCTTGGCCGATGTTCACCACACCCGCTTCGAGATGACCGAGCGCTTCGATAGATTGGATGCCTCCAATCGCCGGCTGGAGCAGTACTTCGGAGCCATCAAGATCGGAGTTGGGGGTGGAGGGTGGATGGAGCAGGCGGTCACAAGTATGGAAGAGGATGAGGGACTGAATGGTAATTCTGGGAGCTTTAGAATTGGTTTGGATTTGGGGAAGAAGAAGGTTAAGGAATTGGTTGTTGGAAGACAGGATTTGCCCGTTGTAGGAATTTGGGGCATTGGAGGATCAGGCAAGACTACTCTGGCTAGAGAGATCTGCAGAGATGATCACGTTCGACGTTATTTCAACGGGAGAATCTTGTTCCTGACAGTGTCACAGTCTCCAAACGTGGAGCAGCTGAGAGCCAAAATATGGGCATATATTATGGGCAATGAACATTTGAATCCTAGTTATGTGATTCGACAGGGGAAGCCGCAATTTGAATGCAGAACCGAAACACGAATCCTGATAGTTCTGGATGATGTGTGGTCGCTCTCTGTTTTAGAACAGCTTGTCTGTAGAATACCTGGTTGTAAATTCCTACTAGTCTCAAGATTCAACTTCCCGACATTTTTTTCTGCGAGCTACAAAGTTGAACTGTTGAGCGAAGAGGACGCCCTATCTCTGTTCTGTCACCATGCCTTTGGCCAGAAGTCAATCCCTTTTGCTGCGAATGGGAATTTGGTCAAGCAGGTAGTGACCGAGTGTGGAAGACTTCCATTAGCCCTTAAAGTCATCGGAGCTTCCTTGCGAGATCAGTCTGAGATGTTTTGGGCAGGTGTGAAAAACAGGCTATCCCAAGGCCAAAGCATAGGGGAATCACATGAAATCAATCTGATTGAAAGAATGGCGATCAGCGTCAATTATCTACCCGCGAAAATCAAGGAATGCTTCCTGGATCTGTGTTCTTTTCCAGAAGACAAGAAGATTCCTCTCGAAGTACTCATCAATATGTGGGTTGAAATCCATGATATTGACGAAACCGAAGCTTTTGCAATTGTCGTTGAGCTCTCAAACAAGAATCTTCTCACCTTGGTGCAAGAGGCACGTGCCGGAGGCATGTATAGCAGTTGCTTTGAGATCTTTGTCACTCAACACGATGTATTGAGAGACGTAGCTCTTAATCTGAGCAGTCGCGAGAGCATTAATGAGCGCCGGCGGTTAGTGATGCCAAAAAGAGAGAATGGAGTCCCTAAAGAATGGTCCAGATATAAAGATCGACCATTTGAGGCTCAGATTGTTTCAATTCATACTGGTGGAATGAAAGAAGCGGATTGGTTAAGAATGGCATTTCCCAAGGCAGAAGTGCTGATCATCAACTTCTCCGCGAATGAATTCTGCTTGCCTCCCTTCATCAATAGAATGCCAAATTTGAGGGCATTGATATTGATAAATTATAGCGCATCATACGCTACTATTCACAATTTTCACATTTTTGAGAATCTGGCTTCCTTAAGGAGCCTCTGGCTTGAAAAAGTTACAATCCCTCAATTTTCAGACTTTCCCTTAATAAGCTTGCGCAAATTATTCGTAGTCTTCTGCAAGATAAATGACAATGTGGATGGGGGAATGACAGATTTGTCTGAGGTCTTCCCAAACCTCTCAGAGCTCACACTTGATCACTGTGATAATTTGAAAGAGCTTTCGCCAAGCATTTGCAGGATACAATCACTTCAGAATCTAAGCCTCACCAACTGCCACAATTTAGTCCAATTGCCCAATGAGCTAGGAAAGCTACTATCTCTGGAGATCCTGCGATTATATGCTTGTCCGGTTCTGCAAGCACTTCCTCCCACCATGGGCGAGCTTCGTAGACTCAAGTACATAGACATATCTCAATGTGTTAATCTTGGACGGATTCCAGCAGAGATAGGAAAACTAGTATATTTGGAGAAGATAGACATGAGGGAGTGCTCTTCAATTAGGCGCGTACCAGAGACTGCAACGTCGTTGAAATCACTGCGACTTGTGATCTGTGATGAGGATGTGTCTGGGATGTGGAGAGATGTGGAGAAAGCTAAGCCAGATGTTTGTGTTCAAGTATCAGAACAGTGTTACGACCTGGATTGGCTTAATGAAAAATGA 2793 0.4619 MAVQGIIEYFELVTLRGGRSWQPRKAAYVLLLLEQVFLSEDVTQKVASIILNLDPGVEFEDYLLLLTVTGSGQEQHAIAIIYKRRQEWRDLEASRRRRSRSGVWKRMAVTDFFAGEIATELMKLLIDISRKSLLCKSSADQLHTYIQQLLPIIEEIKYSGVELPSFRQSQLDRISEMLRSGVELSHKVISSSRWNVYKNLQLAKKMEKLEKNVSRFLNGPMQAHILADVHHTRFEMTERFDRLDASNRRLEQYFGAIKIGVGGGGWMEQAVTSMEEDEGLNGNSGSFRIGLDLGKKKVKELVVGRQDLPVVGIWGIGGSGKTTLAREICRDDHVRRYFNGRILFLTVSQSPNVEQLRAKIWAYIMGNEHLNPSYVIRQGKPQFECRTETRILIVLDDVWSLSVLEQLVCRIPGCKFLLVSRFNFPTFFSASYKVELLSEEDALSLFCHHAFGQKSIPFAANGNLVKQVVTECGRLPLALKVIGASLRDQSEMFWAGVKNRLSQGQSIGESHEINLIERMAISVNYLPAKIKECFLDLCSFPEDKKIPLEVLINMWVEIHDIDETEAFAIVVELSNKNLLTLVQEARAGGMYSSCFEIFVTQHDVLRDVALNLSSRESINERRRLVMPKRENGVPKEWSRYKDRPFEAQIVSIHTGGMKEADWLRMAFPKAEVLIINFSANEFCLPPFINRMPNLRALILINYSASYATIHNFHIFENLASLRSLWLEKVTIPQFSDFPLISLRKLFVVFCKINDNVDGGMTDLSEVFPNLSELTLDHCDNLKELSPSICRIQSLQNLSLTNCHNLVQLPNELGKLLSLEILRLYACPVLQALPPTMGELRRLKYIDISQCVNLGRIPAEIGKLVYLEKIDMRECSSIRRVPETATSLKSLRLVICDEDVSGMWRDVEKAKPDVCVQVSEQCYDLDWLNEK 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0203 930 Gene3D Ribonuclease Inhibitor 653 897 IPR032675 -
Lele28g0203 930 Gene3D - 522 608 IPR036388 -
Lele28g0203 930 Pfam NB-ARC domain 297 515 IPR002182 GO:0043531
Lele28g0203 930 Gene3D - 286 424 IPR027417 -
Lele28g0203 930 Gene3D - 437 521 IPR042197 -
Lele28g0203 930 ProSiteProfiles RPW8 domain profile. 107 255 IPR008808 -
Lele28g0203 930 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 289 537 IPR027417 -
Lele28g0203 930 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 108 927 IPR039203 GO:0050832
Lele28g0203 930 SUPERFAMILY L domain-like 674 893 - -
Lele28g0203 930 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 115 243 IPR008808 -
Lele28g0203 930 PRINTS Disease resistance protein signature 310 325 - -
Lele28g0203 930 PRINTS Disease resistance protein signature 385 399 - -
Lele28g0203 930 PRINTS Disease resistance protein signature 472 486 - -
Lele28g0203 930 PRINTS Disease resistance protein signature 837 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0203 Lele-ChrLele28 1188595 1195655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0203 773 893 Receptor kinase-like Gene Family AT3G05370 31.707 2.16e-10 62.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0189 25 1127938 1131010 Lele28g0203 28 1188595 1195655 hybridization
Lele26g0198 26 1168135 1171260 Lele28g0203 28 1188595 1195655 hybridization