Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0198 ATGGCAGTGACGGACTTCTTTGCCGGCGAAATCGCCACGGAACTCATGAAACTGCTCATAGACATATCTCGCAAGTCACTGCTCTGCAAATCAAGTGCGGACCAGCTCCACACCTACATCCAGCAACTCCTCCCCATCATCGAAGAAATCAAATACTCCGGCGTTGAGCTCTCCTCCTTCCGCCAATCCCAGCTCGATCGCATCTCCGAGATGATCCGTTCTGGCGTCGAGCTTTCCCACAAGGTTCTCTCTTCCAGCCGCTGGAACGTCTACAAGAACTTGCAGCTCGCCAAGAAGATGGAGAAGCTCGAGAAGAACGTCTCCAGGTTCCTTAACGGTCCCATGCAGGCTCATATCTTGGCCGATGTCCACCACACCCGCTTCGAGATGACCGAGCGCTTCGATAGGTTGGATGCCTCCAATCGCCGGCTGGAGCAGTACTTCGGAGCCATCAAGATTGGAGTTGGGGGTGGAGGGTGGATGGAGCAGGCGGTCAGAAGTACGGAAGAGGATGAGGGACTGAATGGTAATTCTGGGAGCTTTAGAATTGGTTTGGATTTGGGGAAGAAGAAGGTAAAGGAATTGGTTGTTGGAAGACAGGATTTGCCCGTTGTAGGAATTTGGGGCATTGGAGGATCAGGCAAGACTACTCTGGCTAGAGAGATCTGCAGAGATGATCACGTTCGACGTTATTTCAAGGAGAGAATCTTGTTCCTGACAGTGTCACAGTCTCCAAACTTGGAGCAGCTGAGAGCCAAAATATGGGCATATATTAAGGGCAATGAACATTTGAATCCTAATAATGTGATTCGACAGGGGAAGCCGCAATTTGAATGCAGAACCGAAACACGAATCCTGATAGTTCTGGATGATGTGTGGTCGCTCTCTGTTTTAGAACAGCTTGTCTGTAGAATACCTGGTTGTAAATTCCTACTAGTCTCAAGATTCAACTTTCCGACAATTTTTTCTGCGAGCTACAGAGTTGAACTGTTGAGCGAAGAGGATTCCCTATCTCTGTTCTGTCACCATGCCTTTGGCCAGAAGTCAATCCCTTTTGCTGCGAATGGGAATTTGGTCAAGCAGGTAGTGACCGAGTGTGGAAGACTTCCATTAGCCCTTAAAGTCATCGGAGCTTCCTTGCGAGATCAGTCTGAGATGTTTTGGGCAGGTGTGAAAAACAGGCTATCCCAAGGCCAAAGCATAGGGGAATCACATGAAATCAACCTGATTGAAAGAATGGCGATCAGCGTCAATTATCTACCCGCGAAAATCAAGGAATGCTTCCTGGATCTGTGTTCTTTTCCGGAAGACAAGAAGATTCCTCTCGAAGTACTCATCAATATGTGGGTTGAAATCCATGATATTGATGAAACCGAAGCTTTTGCAATTGTCGTTGAGCTCTCAAACAAGAATCTTCTCACCTTGGTGCAAGAGGCACGTGTCGGAGGCATGTATAGCAGTTGTTTTGAGATCTTTGTCACTCAACACGATGTATTGAGAGACGTAGCTCTTAATCTGAGCAGTCGCGAGAGCATTAATGAGCGCCGGCGGTTAGTGATGCCAAAAAGAGAGAATGGAGTCCCTAAAGAATGGTCCAGATATAAAGATAGACCATTTGAGGCTCAGATTGTTTCAATTCACACTGGTGGAATGAAAGAAGCGGATTGGTTAAGAATGGCATTTCCCAAGGCCGAAGTGCTGATCATCAACTTCTCCGCGAGTGAATTCTGCTTGCCTTCCTTCATCAATAGAATGCCAAATTTGAGGGCATCGATATTGATAAATTATAGCGCATCATACGCTACTATTCACAATTTTCATATTTTTGAGAATCTGGCTTCCTTAAGGAGCCTCTGGCTTGAAAAAGTTACAATCCCTCAATTTTCAGACTTTCCCTTAATAAGCTTGCGCAAATTATTCGTAGTCCTCTGCAAGATAAATGACAAGGTGGATGGGGGAATGACAGATTTGTCTGAGGTCTTCCCAAACCTCTCAGAGCTCACACTTGATCACTGTGATAATTTAAAAGAGCTTTCGCCAAGCATTTGCAGGATGCAATCACTTCAGAATCTAAGCCTCACCAACTGCCACAATTTAGTCCAATTGCCCAATGAGCTAGGAAAGCTACTATCTCTGGAGATCCTGCGATTATATGCTTGTCCGGCTCTGCAAGCGCTTCCTCCCACCATCGGCGAGCTTCGTAGACTCAAGTACATAGACATATCTCAATGTGTTAATCTTGGACGGATTCCAGCAGAGATAGGAAAACTAGTATATTTGGAGAAGATAGACATGAGGGAGTGCTCTTCAATTAGGCGCGTACCAGAGTCTGCAACGTCGTTGAAATCACTGCGACTTGTGATCTGTGATGAGGATGTGTCTGGGATGTGGAGAGATGTGGAGAAGGCTAAGCCAGATGTTTGTGTTCAAGTATCAGAACAGTGTTACGACCTGGATTGGCTTAATGAAAAATGA 2475 0.461 MAVTDFFAGEIATELMKLLIDISRKSLLCKSSADQLHTYIQQLLPIIEEIKYSGVELSSFRQSQLDRISEMIRSGVELSHKVLSSSRWNVYKNLQLAKKMEKLEKNVSRFLNGPMQAHILADVHHTRFEMTERFDRLDASNRRLEQYFGAIKIGVGGGGWMEQAVRSTEEDEGLNGNSGSFRIGLDLGKKKVKELVVGRQDLPVVGIWGIGGSGKTTLAREICRDDHVRRYFKERILFLTVSQSPNLEQLRAKIWAYIKGNEHLNPNNVIRQGKPQFECRTETRILIVLDDVWSLSVLEQLVCRIPGCKFLLVSRFNFPTIFSASYRVELLSEEDSLSLFCHHAFGQKSIPFAANGNLVKQVVTECGRLPLALKVIGASLRDQSEMFWAGVKNRLSQGQSIGESHEINLIERMAISVNYLPAKIKECFLDLCSFPEDKKIPLEVLINMWVEIHDIDETEAFAIVVELSNKNLLTLVQEARVGGMYSSCFEIFVTQHDVLRDVALNLSSRESINERRRLVMPKRENGVPKEWSRYKDRPFEAQIVSIHTGGMKEADWLRMAFPKAEVLIINFSASEFCLPSFINRMPNLRASILINYSASYATIHNFHIFENLASLRSLWLEKVTIPQFSDFPLISLRKLFVVLCKINDKVDGGMTDLSEVFPNLSELTLDHCDNLKELSPSICRMQSLQNLSLTNCHNLVQLPNELGKLLSLEILRLYACPALQALPPTIGELRRLKYIDISQCVNLGRIPAEIGKLVYLEKIDMRECSSIRRVPESATSLKSLRLVICDEDVSGMWRDVEKAKPDVCVQVSEQCYDLDWLNEK 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0198 824 Pfam NB-ARC domain 191 409 IPR002182 GO:0043531
Lele26g0198 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 431 IPR027417 -
Lele26g0198 824 PRINTS Disease resistance protein signature 366 380 - -
Lele26g0198 824 PRINTS Disease resistance protein signature 204 219 - -
Lele26g0198 824 PRINTS Disease resistance protein signature 279 293 - -
Lele26g0198 824 PRINTS Disease resistance protein signature 731 747 - -
Lele26g0198 824 Gene3D - 331 415 IPR042197 -
Lele26g0198 824 Gene3D - 416 502 IPR036388 -
Lele26g0198 824 Gene3D - 180 318 IPR027417 -
Lele26g0198 824 SUPERFAMILY RNI-like 566 787 - -
Lele26g0198 824 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Lele26g0198 824 Gene3D Ribonuclease Inhibitor 546 791 IPR032675 -
Lele26g0198 824 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 821 IPR039203 GO:0050832
Lele26g0198 824 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 137 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0198 Lele-ChrLele26 1168135 1171260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0198 667 787 Receptor kinase-like Gene Family AT3G05370 31.707 3.26e-10 62.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0198 26 1168135 1171260 Lele27g1893 27 23600082 23603229 hybridization
Lele26g0198 26 1168135 1171260 Lele28g0203 28 1188595 1195655 hybridization