Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0189 ATGAAACTGCTCATAGACATATCTCGCAAGTCACTGCTCTGCAAATCAAGTGCGGACCAGCTCCAAACCTACATCCAGCAACTCCTCCCCATCATCGAAGAAATCAAATACTCCGGCGTTGAGCTCCCCGCCTCCCGCCAATCCCAGCTTGATCGCATCTCTGAGATGCTCCGTTCTGGCGTTGAGCTTTCCCACAAGGTTCTCTCCTCCAGCCGCTGGAACGTCTACAAGAACTTGCAGCTCGCCAAGAAGATGGAGAAGCTCGAGAAGAATGTCTCCAGGTTCCTTAACGGTCCCATGCAAGCTCATATCTTGGCCGATGTCCACCACACCCGCTTCGAGATGACCGAGCGCTTCGATAGGTTGGACGACTCCAATCGCCGGCTAGAGCAGTACTTCGGAGCCATCAAGATTGGAGTTGGGGGTGGAGGGTGGATGGAGCAGGCGCTCAGAAGTATGGAAGAGGATGAGATAGTGGATGGTAATTCTGGGAGCTTTAGAATTGGTTTGGGTCTGGGGAAGAAGAAGGTTAAAGAACTGGTTGTTGGAAGGCAGGATTTGCCCGTTGTAGGGATTTGGGGCATTGGAGGATCAGGCAAGACTACTCTGGCTAGAGAGATCTGCAGAGATGATCATGTTCGATGTTATTTCAAGGAGAGAATCTTGTTCCTGACAGTGTCACAGTCTCCAAACGTGGAGCAGCTGAGAGCCAAAATATGGGGATATATTATGGGCAATGAACATTTGAATCCTAATTATGTGATTCCACCGTGGAAGCCACAATTTGAATGCAGGACCGAAACACGAATCCTGATAGTTCTGGATGATGTGTGGTCGCTCTCTGTATTAGAAAAGCTTGTCTGGAGAATACCTGGTTGTAAATTCCTAGCAGTCTCAAGATTCAACTTCCCGACAATGTTTTCTGCGAGCTACAAAGTTGAGCTGTTGAGCGAAGAGGATGCCCTATCTCTGTTCTGTCACCATGCCTTTGGACAGAAGTCAATCCCTTTTGCTGCGAATGGGAATTTGGTCAAGCAGGTAGTGACCGAGTGTGGAAGACTTCCATTAGCCCTTAAAGTTATTGGAGCTTCCTTGCGAGATCAGTCTGAGATGTTTTGGGCAGGTGTGAAAAACAGGCTTTCCCAAGGCCAAAGCATAGGGGAATCGCATGAAATCAATCTGATTGAAAGAATGGCGATCAGCATCAATTATCTACCAGCGAAAATCAAGGAATGCTTCCTGGATCTGTGCTCTTTCCCAGAAGACAAGAAGATCCCTCTCGAAGTACTAATCAATATGTGGGTTGAAATCCATGATATTGATGAAACCGAAGCTTTTGCAATTGTCGTTGAGCTGTCAAACAAGAATCTTCTCACCTTGTTGCAAGAGGCACGTGCCGGAGGCATGTATAGCAGTTGCTTTGAGATCTTTGTCACTCAACACGATGTATTGAGAGACGTAGCTCTTAATTTGAGCAGTCGTGAGAGCATTAATGAGCGCCGGCGGTTAGTCATGCCAAAAAGAGATAATGGAGTCCCTAAAGAATGGTCAAGATATAAAGATCGACCATTTGAGGCTCAGATTGTTTCACTTCACACTGGTGAAATGAAAGAATCGGACTGGTTAAGAATGGAATTTCCCAAGGCCGAAGTGCTGATCATCAACTTGTCCGCGAGTGAATTGTTCTTGCCTCCCTTCATTAATAGAATGCCAAATTTGAGGGCATTGATGTTGATAAATTATAGCGCATCATACGCTTCCATTCACAATTTTCACGTTTTTGAGAAACTGGCTTCCTTAAGGAGCCTGTGGCTTGAAAAAGTTACGATCCCTCAATTTTCAGACTCTCCCTTAATAAGCTTGCGCAAATTATTTATAGTCCTCTGCAAGATAAATGAGAATGTGGATGGGGGATTGACAGATTTATCTGAGGTGTTCCCAAACCTCTCAGAGCTCACACTTGATCACTGTGATAATTTAAGAGAGCTTCCCCCAAGCATTTGCAGGATGCAATCACTTCAGAATCTAAGCCTCACCAACTGCCACAATTTAGTCCAACTGCCCGATGAGCTAGGAAAGCTACGATCTCTGGAGATCCTGCGATTATATGCTTGTCCGGCTCTGCAAGCACTTCCTCCCAGCATCGGCGAGCTTCGTAGACTCAAGTACATAGACATATCTCAATGTGTTAATCTTGGACGGATTCCAGCAGAGATAGGAAGACTAGGATATTTGGAGAAGATAGACATGAGGGAGTGCTCTTCAATCAGGCGCGTACCAGAGTCTACAACGTCGCTGAAATCACTGCGACTTGTCATATGTGACGAGGATGTGTCTGGGATGTGGAGAGATGTGGAGAAGGCTAAGCCAGATGTTTGTGTTCAAGTATCAGAACAGTGTTACGACCTGGATTGGCTTAATGAAAAATGA 2430 0.4601 MKLLIDISRKSLLCKSSADQLQTYIQQLLPIIEEIKYSGVELPASRQSQLDRISEMLRSGVELSHKVLSSSRWNVYKNLQLAKKMEKLEKNVSRFLNGPMQAHILADVHHTRFEMTERFDRLDDSNRRLEQYFGAIKIGVGGGGWMEQALRSMEEDEIVDGNSGSFRIGLGLGKKKVKELVVGRQDLPVVGIWGIGGSGKTTLAREICRDDHVRCYFKERILFLTVSQSPNVEQLRAKIWGYIMGNEHLNPNYVIPPWKPQFECRTETRILIVLDDVWSLSVLEKLVWRIPGCKFLAVSRFNFPTMFSASYKVELLSEEDALSLFCHHAFGQKSIPFAANGNLVKQVVTECGRLPLALKVIGASLRDQSEMFWAGVKNRLSQGQSIGESHEINLIERMAISINYLPAKIKECFLDLCSFPEDKKIPLEVLINMWVEIHDIDETEAFAIVVELSNKNLLTLLQEARAGGMYSSCFEIFVTQHDVLRDVALNLSSRESINERRRLVMPKRDNGVPKEWSRYKDRPFEAQIVSLHTGEMKESDWLRMEFPKAEVLIINLSASELFLPPFINRMPNLRALMLINYSASYASIHNFHVFEKLASLRSLWLEKVTIPQFSDSPLISLRKLFIVLCKINENVDGGLTDLSEVFPNLSELTLDHCDNLRELPPSICRMQSLQNLSLTNCHNLVQLPDELGKLRSLEILRLYACPALQALPPSIGELRRLKYIDISQCVNLGRIPAEIGRLGYLEKIDMRECSSIRRVPESTTSLKSLRLVICDEDVSGMWRDVEKAKPDVCVQVSEQCYDLDWLNEK 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0189 809 PRINTS Disease resistance protein signature 189 204 - -
Lele25g0189 809 PRINTS Disease resistance protein signature 716 732 - -
Lele25g0189 809 PRINTS Disease resistance protein signature 351 365 - -
Lele25g0189 809 PRINTS Disease resistance protein signature 264 278 - -
Lele25g0189 809 ProSiteProfiles RPW8 domain profile. 1 134 IPR008808 -
Lele25g0189 809 Gene3D - 401 487 IPR036388 -
Lele25g0189 809 Gene3D Ribonuclease Inhibitor 539 789 IPR032675 -
Lele25g0189 809 Gene3D - 170 306 IPR027417 -
Lele25g0189 809 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 416 IPR027417 -
Lele25g0189 809 SUPERFAMILY RNI-like 559 771 - -
Lele25g0189 809 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 2 122 IPR008808 -
Lele25g0189 809 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 806 IPR039203 GO:0050832
Lele25g0189 809 Gene3D - 316 400 IPR042197 -
Lele25g0189 809 Pfam NB-ARC domain 176 393 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0189 Lele-ChrLele25 1127938 1131010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0189 594 774 Receptor kinase-like Gene Family AT5G25910 30.769 2.97e-11 65.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0189 25 1127938 1131010 Lele27g1893 27 23600082 23603229 hybridization
Lele25g0189 25 1127938 1131010 Lele28g0203 28 1188595 1195655 hybridization