Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0184 ATGGCGAAATCCAGTGCAGACGATGCTGAACTCCGGCGAGCTTGCCAGTCTGCGATTGAAGGCACCAAACAGAAGGTTGTTTTGTCGATGCGTGTTGCCAAGAGTCGCGGCATTTGGGGAAAATCCGGCATGCTCGGCGGCCGTCAAGCGATGGCCAAGCCCAGGATTCTCGCTCTCTGCGTCAAAGTGAAAGGCCAGAGGACTAAAGCTTTTCTTCGAGTCTTAAAGTACTCCAACGGAGGAGTTATTGAGCCTGCAAAGTTATACAAGTTGAAACACCTCTCGAAAATGGAACTTATATCAGCTGACCCCAGTGGATGTACGTTTACGCTGGGATTTGATAACATCAGAAACCATACTTCGACTCCTCCTCAGTGGACAATGCGCAATGTTGATGACAGGAACCGCATCCTAATGCATATATTAAATATATGCAAAGATGTACTCGGTCGCCTTCCTAAGGTTATTGGCATAGACGTTGTGGAGATGGCTCTCTGGGCTAAGGAGAACACACCCGCAGTTGCTGCTCATGCAAGCCCACAAGATGGTGGTGGTCCTGTTGAATCTGATGTGACTGAGACAGAACTGAAAGTCAATGTAGAGAAGGAACTTGTTTCCCAGGCAGAAGAAGAGGACATGAAGGCCCTTCTCGGAAATTATGTCATGGGTATTGGTGAAGCAGAGGCGTTTTCTGAAAGGCTGAAGAGAGAGCTCCAGGCACTGGAAGCAGCAAATGTGCATGCCATCTTAGAAAGTGAACCTTTGATAGACAAGGTGTTGCAGGGGCTTGAAGCGGCAGCACATTGTGCGGAAGACATCGATGAATGGTTGTGCATTTTCAATGTGAAACTAAGGCACATGAGGGAGGATATTGAATCAATAGAAACACGCAATAACAAGTTGGAAACGCAATCAGTAAACAACAAGGCTCTTATTGAGGAACTTGATAAGCTTCTTGAGCGGTTGCATGTCCCTGCTGAGCATGCAGCTTGTCTGACAGGTGGTTCATTTGATGAGGGGCGTATGCTTCGGAATGTGGAAGCATGTGAGTGGTTGGCAGGTGCCTTGCATAGTCTCCAAGGGATGCTTAACACAGATCCTGCTTTTGCAAAGATGAGAGCTGTCAAAGACAGGCATGCGGAACTTGAAAAATTAAAAACTACTTTTGTCAGGAGAGCTTCTGAGTTCTTATCAAATTATTTTGCCAGTTTGGTGGATTTCATGATTAATGATAAAAATTACTTTTCCCAGAAAGGACAGTTGAAGAGGCCTGACCATGCTGACTTACGGCGCAAATGCAAGACATACGCACGCCTTCTACGACAATTAAAGGGTCTTGATAAAAATTGCTTAGGTACAGCGAGAAAAGCTTATTGCAGTTCTCTCAACGTGCTTCTCAGAAGGGAGGCCCGTGAGTTTGCGAATGAACTTCGTGCTAATACTAAAGCACCTAAAAATCCAACTGTTTGGCTTGAAGGTTCCGCAGGTTCTGCTCAGAATGCGAACATTGCTGACACTTCTTCAGTTTCTGAGGCTTATGCAAAGATGCTCACAGTTTTTGTCCCACTCCTGGTGGATGAGAGCTCTTTTTTGGCTCGCTTCATGTGTTTCGAAGTTCCCACGTCTCCTCCCGGACGCAGTACTAATGATGAAGATGATGAATATGATGGAGATGGTGATGGAGCCGATGATTATGATGATGATAATTTGGGGATTATGGACATCGACGAGAATGATAGCAAATCCGGTACTAATCCCGCGGAGCTTGCATCTTTAAATGAGTCCCTTCAGGATTTGCTGGATGGCATCCAGGAAGACTTTTATTCAGTGGTAGATTGGGCATACAAAATTGATCCTTTGTGCTGCATATCAATGCACGGAATAACAGAGCGCTTTCTCTCAGGTCTTAAAGCTGATGTGGCAGGATTTGTTAGCCTTGTGCTCGGTGACCTGGAGTCTCGGATATCCATGCAGTTCATCCGTTTTGTAGATGAAGCTTGCCATCAGATCGAAAGATATGAGCGCAATGTGCGCCAAATGGGTGTCTTGGCTTACATTCCCAGATTTGCAACCCTTGCAACGCGGATGGAGCAGTACATCCAAGGACAGTCAAGGGATTTGGTTGACCAAGCATATATGAAATTTGTTACCATAATGTTTGTGACGTTAGAAAAGATTGCACAAATGGATCCAAAATATGCAGATATTTTTCTCCTGGAGAACTATGCAGCATTTCAAAATAGCTTGTATGACCTGGCTAATGTTGTTCCCACATTGGCAAAGTTTTACCATCAGGCGAGTGAATCCTATGAACAAGCTTGCGCACGACATATTAGCATGATTCCTTACCAGCTGGGGTTGTCAAAAGCGGATATGAGGAAGATGTTAAAAGCCAGTTTATCTGGGGTCGATAGGTCTTTTGGTGCAATGTGTAAGAAATTACAGAAGAACTTGACTTCAGAGGAACTGTTACCTTCCTTGTGGGAAAAATGCAAGAAGGAGTTTCTCGATAAGTATGAAAGTTTTGTGCAGCTCGTCTCCAAGACCTACCCATCGGAGAATATACCATCTGTATCAGAGATCAGAGACATTTTAGTTAGCATTTAA 2607 0.448 MAKSSADDAELRRACQSAIEGTKQKVVLSMRVAKSRGIWGKSGMLGGRQAMAKPRILALCVKVKGQRTKAFLRVLKYSNGGVIEPAKLYKLKHLSKMELISADPSGCTFTLGFDNIRNHTSTPPQWTMRNVDDRNRILMHILNICKDVLGRLPKVIGIDVVEMALWAKENTPAVAAHASPQDGGGPVESDVTETELKVNVEKELVSQAEEEDMKALLGNYVMGIGEAEAFSERLKRELQALEAANVHAILESEPLIDKVLQGLEAAAHCAEDIDEWLCIFNVKLRHMREDIESIETRNNKLETQSVNNKALIEELDKLLERLHVPAEHAACLTGGSFDEGRMLRNVEACEWLAGALHSLQGMLNTDPAFAKMRAVKDRHAELEKLKTTFVRRASEFLSNYFASLVDFMINDKNYFSQKGQLKRPDHADLRRKCKTYARLLRQLKGLDKNCLGTARKAYCSSLNVLLRREAREFANELRANTKAPKNPTVWLEGSAGSAQNANIADTSSVSEAYAKMLTVFVPLLVDESSFLARFMCFEVPTSPPGRSTNDEDDEYDGDGDGADDYDDDNLGIMDIDENDSKSGTNPAELASLNESLQDLLDGIQEDFYSVVDWAYKIDPLCCISMHGITERFLSGLKADVAGFVSLVLGDLESRISMQFIRFVDEACHQIERYERNVRQMGVLAYIPRFATLATRMEQYIQGQSRDLVDQAYMKFVTIMFVTLEKIAQMDPKYADIFLLENYAAFQNSLYDLANVVPTLAKFYHQASESYEQACARHISMIPYQLGLSKADMRKMLKASLSGVDRSFGAMCKKLQKNLTSEELLPSLWEKCKKEFLDKYESFVQLVSKTYPSENIPSVSEIRDILVSI 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0184 868 Coils Coil 191 211 - -
Lele28g0184 868 MobiDBLite consensus disorder prediction 551 571 - -
Lele28g0184 868 Pfam Exocyst complex component Sec3 227 499 IPR019160 GO:0000145|GO:0006887
Lele28g0184 868 Pfam Exocyst complex component Sec3 504 772 IPR019160 GO:0000145|GO:0006887
Lele28g0184 868 Coils Coil 224 251 - -
Lele28g0184 868 MobiDBLite consensus disorder prediction 542 571 - -
Lele28g0184 868 PANTHER SEC3/SYNTAXIN-RELATED 781 865 - -
Lele28g0184 868 SMART Sec3_PIP2_bind_2 50 148 IPR028258 -
Lele28g0184 868 Coils Coil 284 321 - -
Lele28g0184 868 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 52 146 IPR028258 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0184 Lele-ChrLele28 1078501 1085544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0184 1 868 EF-hand Containing Proteins AT1G47550 76.143 0.0 1386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0172 25 1037911 1047527 Lele28g0184 28 1078501 1085544 hybridization
Lele26g0181 26 1062125 1069151 Lele28g0184 28 1078501 1085544 hybridization