Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0181 ATGGCGAAATCCAGTGCAGACGATGCTGAACTCCGGCGAGCTTGCCAGTCTGCGATTGAAGGCACCAAACAGAAGGTTGTTTTGTCGATGCGTGTTGCCAAGAGTCGCGGCATTTGGGGAAAATCCGGTATGCTCGGCGGCCGTCAAGCGATGGCCAAGCCCAGGATTCTCGCTCTCTGCATCAAAGTTAAAGGCCAGAGGACTAAAGCTTTTCTTCGAGTCTTAAAGTACTCCAATGGAGGAGTTATTGAGCCTGCAAAGTTATACAAGTTGAAACACCTCTCGAAAATGGAACTTATATCAGCGGACCCCAGTGGATGTACGTTTACGCTGGGATTTGATAACATCAGAAACCATACTTCGACTCCTCCTCAGTGGACAATGCGCAATGTTGATGACAGGAACCGCATCCTTATGCATATATTAAATATATGCAAAGATGTACTCGGTCGCCTTCCCAAGGTTATTGGCATAGATGTTGTGGAGATGGCTCTCTGGGCTAAGGAGAACACACCCGCAGTTGCTGCTCATGCAACCCCACAAGATGGTGGTGGTCCTGTTGAATCTGATGTGACTGAGACAGAACTGAAAGTCAATGTAGAGAAGGAACTTGTTTCCCAGGCAGAAGAAGAGGACATGAAGGCCCTTCTCGGAAATTATGTCATGGGTATTGGTGAAGCAGAGGCGTTTTCTGAAAGGCTGAAGAGAGAGCTCCAGGCACTGGAAGCAGCAAATGTGCATGCCATCTTAGAAAGTGAACCTCTGATAGATGAGGTGTTGCAGGGGCTTGAAGCGGCAGCACATTGTGCGGAAGACATCGATGAATGGTTGTGCATTTTCAATGTGAAACTAAGGCACATGAGGGAGGATATTGAATCAGTAGGGACTTTTACATTTCACGTTTGGAATATAACTTTCTTAGCGCAGTTTGATTGGTGGTGTTACAGAATAATACTAATTCTTATAGAAACACGCAATAACAAGTTGGAAACGCAATCAGTAAACAACAAGGCTCTTCTTGAGGAACTTGATAAGCTTCTTGAGCGGTTGCATGTCCCTGCTGAGCATGCAGCTTGTCTGACAGGAGGTTCATTTGATGAGGGGCGTATGCTTCGGAATGTGGAAGCATGTGAGTGGTTGGCAGGTGCCTTGCATAGTCTCCAAGGGATGCTTAACACAGATCCTGCTTTTGCAAAGATGAGAGCTATCAAAGACAGGCATGCGGAACTTGAAAAATTAAAAACTACTTTTGTCAGGAGAGCTTCTGAGTTCTTATCAAATTATTTTGCCAGTTTGGTGGATTTCATGATTAATGATAAAAATTACTTTTCCCAGAAAGGACAGTTGAAGAGGCCTGATCATGCTGACTTACGGCGCAAATGCAAGACATACGCACGCCTTCTACGACAATTAAAGGGTCTTGATAAAAATTGCTTAGGTACAGCGAGGAAAGCTTATTGCAGTTCTCTCAACGTGCTTCTCAGAAGGGAGGCCCGTGAGTTTGCGAATGAACTTCGTGCTAATACTAAAGCACCTAAAAATCCAACTGTTTGGCTTGAAGGTTCCGCAGGTTCTGCTCAGAATGCGAACATTGCTGACACTTCTTCAGTTTCTGAGGCTTATGCAAAGATGCTCACAGTTTTTGTCCCACTTCTGGTGGATGAGAATTTCACCAAACGGTTTAATTTTATAGGTACTAATCCCGCGGAGCTTGCATCTTTAAATGAGTCCCTTCAGGATTTGCTGGATGGGATCCAGTTGATGTCGGTGCCGACAACATTGGCATCCTTGGAAGAGCACTGTGTGAAGTTAAAGAATGAGACTGTTAACGCTAGCTTCCAGTTTAAAGCAACTAACTTCCAGAATGGAGTAAGCCTAGAAGACTTTTATTCGGTGGTAGATTGGGCATACAAAATTGATCCTTTGTGCTGCATATCAATGCAAGGAATAACAGAGCGCTTTCTCTCAGGTCTGAAAGCTGATGTGGCAGGATTTGTTAGCCTTGTGCTCGGTGACCTGGAGTCTCGGATATCCATGCAGTTCATCCGTTTTGTAGATGAAGCTTGCCATCAGATTGAAAGATATGAGCGCAATGTGCGCCAAATGGGTGTCTTGGCTTACATTCCCAGATTTGCAACCCTTGCAACGCGGATGGAGCAGTACATCCAAGGACAGTCAAGGGATTTGGTTGACCAAGCATATATGAAATTTGTTACAATAATGTTTGTAACGTTAGAAAAGATTGCACAAATGGATCCAAAATATGCTGATATTTTTCTCCTGGAGAACTATGCAGCATTTCAAAATAGCTTGTATGACCTGGCCAATGTTGTTCCCACATTGGCAAAGTTTTACCATCAGGCGAGTGAATCCTATGAACAAGCTTGCGCACGACATATTAGCATGGTTATTTACTATCAATTTGAACGTCTTTTCCAGTTTGCTAAAAGGATTGAGGACTTAATGTTCACTATCCAACCTGAAGAGATTCCTTACCAGCTGGGGTTGTCAAAAGCGGATATGAGGAAGATGTTAAAAGCCAGTTTATCTGGGGTCGATAGGTCTTTTGGTGCAATGTGTAAGAAATTACAGAAGAACTTGACTTCAGAGGAACTGTTACCTTCCTTGTGGGAAAAATGCAAGAAGGAGTTTCTCGATAAGTATGAAAGTTTTGTGCAGCTCGTCTCCAAGACCTACCCATCGGAGAATATACCATCTGTAGCAGAGATCAGAGACATTTTAGTTAGCATTTAA 2754 0.4383 MAKSSADDAELRRACQSAIEGTKQKVVLSMRVAKSRGIWGKSGMLGGRQAMAKPRILALCIKVKGQRTKAFLRVLKYSNGGVIEPAKLYKLKHLSKMELISADPSGCTFTLGFDNIRNHTSTPPQWTMRNVDDRNRILMHILNICKDVLGRLPKVIGIDVVEMALWAKENTPAVAAHATPQDGGGPVESDVTETELKVNVEKELVSQAEEEDMKALLGNYVMGIGEAEAFSERLKRELQALEAANVHAILESEPLIDEVLQGLEAAAHCAEDIDEWLCIFNVKLRHMREDIESVGTFTFHVWNITFLAQFDWWCYRIILILIETRNNKLETQSVNNKALLEELDKLLERLHVPAEHAACLTGGSFDEGRMLRNVEACEWLAGALHSLQGMLNTDPAFAKMRAIKDRHAELEKLKTTFVRRASEFLSNYFASLVDFMINDKNYFSQKGQLKRPDHADLRRKCKTYARLLRQLKGLDKNCLGTARKAYCSSLNVLLRREAREFANELRANTKAPKNPTVWLEGSAGSAQNANIADTSSVSEAYAKMLTVFVPLLVDENFTKRFNFIGTNPAELASLNESLQDLLDGIQLMSVPTTLASLEEHCVKLKNETVNASFQFKATNFQNGVSLEDFYSVVDWAYKIDPLCCISMQGITERFLSGLKADVAGFVSLVLGDLESRISMQFIRFVDEACHQIERYERNVRQMGVLAYIPRFATLATRMEQYIQGQSRDLVDQAYMKFVTIMFVTLEKIAQMDPKYADIFLLENYAAFQNSLYDLANVVPTLAKFYHQASESYEQACARHISMVIYYQFERLFQFAKRIEDLMFTIQPEEIPYQLGLSKADMRKMLKASLSGVDRSFGAMCKKLQKNLTSEELLPSLWEKCKKEFLDKYESFVQLVSKTYPSENIPSVAEIRDILVSI 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0181 917 Coils Coil 191 211 - -
Lele26g0181 917 SMART Sec3_PIP2_bind_2 50 148 IPR028258 -
Lele26g0181 917 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 52 146 IPR028258 -
Lele26g0181 917 Coils Coil 224 251 - -
Lele26g0181 917 PANTHER SEC3/SYNTAXIN-RELATED 62 913 - -
Lele26g0181 917 Coils Coil 329 349 - -
Lele26g0181 917 Pfam Exocyst complex component Sec3 322 522 IPR019160 GO:0000145|GO:0006887
Lele26g0181 917 Pfam Exocyst complex component Sec3 626 900 IPR019160 GO:0000145|GO:0006887
Lele26g0181 917 Pfam Exocyst complex component Sec3 227 295 IPR019160 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0181 Lele-ChrLele26 1062125 1069151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0181 1 917 EF-hand Containing Proteins AT1G47550 70.031 0.0 1346
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0181 26 1062125 1069151 Lele27g1910 27 23680627 23688423 hybridization
Lele26g0181 26 1062125 1069151 Lele28g0184 28 1078501 1085544 hybridization