Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1893 ATGGCAGTGACGGACTTCTTCGCGGGCGAAATCGCCACGGAACTCATGAAACTGCTCATAGACATATCTCGCAAGTCACTACTCTGCAAATCAAGTGCGGACCAGCTCCACACCTACATCCAGCAACTCCTCCCCATCATTGAAGAAATAAAATACTCCGGCGTTGAGCTCTCCGCCGTCCGCCAATCCCAGCTTGATCGCATCTCTGAGATGCTCCGTTCTGGCGTCGAGCTTTCCCGCAAGGTTCTCTCCTCCAGCCGCTGGAACGTCTACAAGAACTTGCAGCTCGCCAAGAAGATGGAGAAGCTCGAGAAGAACGTCTCCAGGTTCCTTAACGGTCCCATGCAGGCTCATATCTTGGCCGATGTCCACCACACCCGCTTCGAGATGACCGAGCGCTTCGATAGGTTGGACGACTCCAATCGCCGGCTGGAGCAGTACTTCGGAGCCATCAAGATTGGAGTTGGGGGTGGAGGGTGGATGGAGCAGGCGGTCAGAAGTATGGAAGAGGATGAGATAGTGGATGGTAATTCTGGGAGCTTTAGAATTGGTTTGGGTCTGGGGAAGAAGAAGGTTAAGGAACTGGTTGTTGGAAGACAGGATTTGCCCGTTGTCGGGATTTGGGGCATTGGAGGATCAGGCAAGACTACTCTGGCTAGAGAGATCTGCAGAGATGATCATGTTCGATGTTATTTCAAGGAGAGAATCTTGTTCCTGACAGTGTCACAGTCTCCAAACGTGGAGCAGCTGAGAGCCAAAATTTGGGGATATATTATGGGCAATGAACATTTGAATCCTAATAATGTGATTCCACAGTGGAAGCTGCAATTTGAATGCAGGACCGAAACACGAATCCTGATAGTTCTGGATGATGTGTGGTCGCTCTCTGTATTAGAACGGCTTGTCTGGAGAATACCTGGTTGTAAATTCCTAGTAGTCTCAAGATTCAACTTCCCGACAATGTTTTCTGCGAGCTACAAAGTTGAGCTGTTGAGCGAAGAGGATGCCCTATCCCTGTTCTGTCACCATGCCTTTGGACAGAAGTCAATCCCTTTTGCTGCGAATGGGAATTTGGTCAAGCAGGTAGTGACCGAGTGTGGAAGACTTCCATTAGCCCTTAAAGTTATTGGAGCTTCCTTGCGAGATCAGTCTGAGATGTTTTGGGCAGGTGTGAAAAGCAGGCTTTCCCAAGGCCAAAGCATAGGGGAATCGCATGAAATCAATCTGATTGAAAGAATGGCGATCAGCATCAATTATCTACCCGCGAAAATCAAGGAATGCTTCCTGGATCTGTGCTCTTTCCCAGAAGACAAGAAGATCCCTCTCGAAGTACTCATCAATATGTGGGTTGAAATCCATGATATTGATGAAACCGAAGCTTTTGCAATTGTCGTTGAGCTGTCAAACAAGAATCTTCTCACCTTGTTGCAAGAGGCACGTGCCGGAGGCATGTATAGCAGTTGCTTTGAGATCTTTGTCACTCAACACGATGTATTGAGAGACGTAGCTCTTAATTTGAGCAGCCGTGAGAGCATCAATGAGCGCCGGCGGTTAGTCATGCCAAAAAGAGAAAATGGAGTCCCTAAAGAATGGTCAAGATATAAAGATCGACCATTTGAGGCTCAGATTGTTTCAGTTCACACTGGTGAAATGAAAGAACCGGACTGGTTAAGAATGGAATTTCCCAAGGCCGAAGTGCTGATCATCAACTTGTCCGCGAGTGAATTCTTCTTACCTCCCTTCATTAATAGAATGCCAAATTTGAGGGCATTGATGTTGATAAATTATAGCGCATCATACGCTTCCATTCACAATTTTCACGTTTTTGAGAAACTGGCTTCCTTAAGGAGCCTCTGGCTTGAAAAAGTTACAATCCCTCAATTTTCAGACTCTCCCTTAATAAGCTTGCGCAAATTATTTATAGTCCTCTGCAAGATAAATGAGAATGTGGATGGGGGATTGACAGATTTGTCTGAGGTTTTCCCAAACCTCTCAGAGCTCACACTTGATCACTGTGATAATTTAAGAGAGCTTTCCCCAAGCATTTGCAGGATGCAATCACTTCAGAATCTAAGCCTCACCAACTGCCACAATTTAGTCCAACTGCCCGATGAGCTAGGAAAGCTACGATCTCTGGAGATCCTGCGATTATATGCTTGTCCGGCTCTGCAAGCACTTCCTCCCAGCATCGGCGAGCTTCGTAGACTCAAGTACATAGACATATCTCAATGTGTTAATCTTGGACGGATTCCAGCGGAGATAGGAAGACTAGGATATTTGGAGAAGATAGACATGAGGGAGTGCTCTTCAATCAGGCGCGTACCAGAGTCTACAACGTCGCTGAAATCACTGCGACTTGTCATATGTGACGAGGATGTGTCTGGGATGTGGAGAGATGTGGAGAAGGCTAAGCCAGATGTGTGTGTTCAAGTATCAGAACAGTGTTACGACCTGGATTGGCTTAGTGAAAAATGA 2475 0.4667 MAVTDFFAGEIATELMKLLIDISRKSLLCKSSADQLHTYIQQLLPIIEEIKYSGVELSAVRQSQLDRISEMLRSGVELSRKVLSSSRWNVYKNLQLAKKMEKLEKNVSRFLNGPMQAHILADVHHTRFEMTERFDRLDDSNRRLEQYFGAIKIGVGGGGWMEQAVRSMEEDEIVDGNSGSFRIGLGLGKKKVKELVVGRQDLPVVGIWGIGGSGKTTLAREICRDDHVRCYFKERILFLTVSQSPNVEQLRAKIWGYIMGNEHLNPNNVIPQWKLQFECRTETRILIVLDDVWSLSVLERLVWRIPGCKFLVVSRFNFPTMFSASYKVELLSEEDALSLFCHHAFGQKSIPFAANGNLVKQVVTECGRLPLALKVIGASLRDQSEMFWAGVKSRLSQGQSIGESHEINLIERMAISINYLPAKIKECFLDLCSFPEDKKIPLEVLINMWVEIHDIDETEAFAIVVELSNKNLLTLLQEARAGGMYSSCFEIFVTQHDVLRDVALNLSSRESINERRRLVMPKRENGVPKEWSRYKDRPFEAQIVSVHTGEMKEPDWLRMEFPKAEVLIINLSASEFFLPPFINRMPNLRALMLINYSASYASIHNFHVFEKLASLRSLWLEKVTIPQFSDSPLISLRKLFIVLCKINENVDGGLTDLSEVFPNLSELTLDHCDNLRELSPSICRMQSLQNLSLTNCHNLVQLPDELGKLRSLEILRLYACPALQALPPSIGELRRLKYIDISQCVNLGRIPAEIGRLGYLEKIDMRECSSIRRVPESTTSLKSLRLVICDEDVSGMWRDVEKAKPDVCVQVSEQCYDLDWLSEK 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1893 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 431 IPR027417 -
Lele27g1893 824 SUPERFAMILY RNI-like 573 786 - -
Lele27g1893 824 Gene3D Ribonuclease Inhibitor 553 804 IPR032675 -
Lele27g1893 824 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Lele27g1893 824 Gene3D - 184 322 IPR027417 -
Lele27g1893 824 PRINTS Disease resistance protein signature 366 380 - -
Lele27g1893 824 PRINTS Disease resistance protein signature 204 219 - -
Lele27g1893 824 PRINTS Disease resistance protein signature 279 293 - -
Lele27g1893 824 PRINTS Disease resistance protein signature 731 747 - -
Lele27g1893 824 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 821 IPR039203 GO:0050832
Lele27g1893 824 Gene3D - 413 502 IPR036388 -
Lele27g1893 824 Gene3D - 330 412 IPR042197 -
Lele27g1893 824 Pfam NB-ARC domain 191 408 IPR002182 GO:0043531
Lele27g1893 824 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 137 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1893 Lele-ChrLele27 23600082 23603229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1893 609 788 Receptor kinase-like Gene Family AT5G25910 30.387 4.11e-10 61.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0189 25 1127938 1131010 Lele27g1893 27 23600082 23603229 hybridization
Lele26g0198 26 1168135 1171260 Lele27g1893 27 23600082 23603229 hybridization