Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1428 ATGGAGCCGGACGTGAGCATTGAAAGCTCGTCGAGGATCCAGGTGGCGGTACTGCCGATCGGTACTGTGCCATCGGATATGCTGCGGGACTATTATTCTATGTTGCTTCCTCTACACACGATACCTCTCTCGGCAATCAGCTCCTTCTACACAGAGCATCAGAAATCACCGTTCGCTCATCAGCCATGGGACTCGGGGTTCCTCCAATTTAAATTTGTTCTGGGAGGGACGCAACCGAGCCCATGGGAGGACTTCCAGTCTCATCGTAAGACCCTGGCGGTCATTGGCATTTGCCATTGCCCTTCCTCACCCGATCTTGATGCTGTCGTCGAACAATTTTCTAACTGCTGCAAGTCTTACCCTTCATCGCTTGTCGATCGCTGCTTTGCATTCTGCCCAGATGATTCGCAGGTGGGGGTTTCTATATGTGCATTTTACTCCTTTTGGTCACTTGAGGATGGAGGTAAAAAGGGCGGTACTTTAAGGTTGTTTCCCCCTGCTGATCGTCAAACACTGGAGTTCCACCTGAACACTATGATGCAAGAAGTTGCTGCCTCGTTATTGATGGAATTTGAAAAGTGGGTGCTTCAGGTCGAATCTTCAGGCACCATACTCAAGACCCCTTTGGATTCTCAAGCGAGTCTCAGCTCAGAGGAGGTTATCAAGGCTAAAAAACGAAGGCTTGGGCGTGCACAGAAGACAATAGGTGATTATTGCTTGCTGGCTGGATCGCCAGTTGATGCAAATGCCCATTATTCTACTGCATTGGAACTTGCCAGGTTGACCGCCGATTACTTCTGGTATGCCGGCGCACTGGAGGGGAGCGTTTGTGCCTTGCTGATTGATCGTATGGGCCAGAAAGATTCAATCTTGGAGGAGGAAGTTAGATATCGTTACAACAGCGTAATCTTGAATTACAAGAAGTCTCAAGATAATGCTCAGAGAGTCTCTCCCTTAAGTTTTGAACTTGAAGCTACTTTGAAATTGGCAAGGTTTCTTTGCAGGAGAGAGCTGGCGAAGGAGGTGACGGAGTTGTTGACTAATGCTGCAGATGGTGCTAAATCTTTAATAGATGCCAGTGATAGACTCATATTGTTTGTTGAAATAGCCCGTTTATATGGCAGTCTTGGTTACGAGAGAAAAGCTGCGTTTTTTACAAGGCAGGTTGCTCAGTTATATCTGCAGCAAGATAATCAGTTGGCTGCAATTAGTGCTTTGCAAGTTTTGGCACTGACCACGAAAGCTTATCATGTTCAAAGTAGAGCATTGGCGTTTGAGAATTCTTTACCTAACAAGGGAATCGGATCAAGTAATGCAGATAGTGGGAAAAAGTATCCCCAATCAGCAGTCTCACTATTTGAATCTCAGTGGAGTACCCTTCAGATGGTGGTATTAAGAGAAATTCTGCTTTCTGCTATTCGTGCTGGAGATCCTCTTGCTGCATGGAGTGCAGCAGCAAGACTACTCAGATCTTATTATCCTCTAATTACTCCTGTTGGGCAAAATGGCCTAGCTAGTGCACTTAAAAATTCAGCTGAAAGGCTGCCACCAGGGACTCGTTGTGCTGATCCTGCCTTACCTTTTATAAGGTTGCATTCTTTTCCTCTCCATCCAACACAAATGGACATCGTAAAACGGAACACAGCTAGGGAAGACTGGTGGGCAGGTTCTGCTCCTTCAGGCCCTTTCATTTATACACCATTTAGCAAAGGAGAGTTCAATAATGCTAAGAAGCAGGAGCTTATTTGGATTGTTGGAGAGCCGGCCCAGGTCTTGGTGGAATTGGCAAATCCATGTGGCTTTGATTTGAAGGTTGATAGCATCTATTTGTCTGTGCATTCAGGAAATTTTGATGCTTTCCCTGTGAGCGTAAGCCTTCCACCTAATTCATCAAAAGTGATCACCTTATCAGGAATCCCAACATCTATGGGAGTAGTTACAGTTCCTGGGTGCATTGTTCATTGTTTTGGTGTTGTTACTGAACACCTGTTTAAAGATGTTGACAACCTGCTTCTTGGAGCAGCGCAAGGACTTGTCCTCTCTGATCCTTTCCGCTGCTGTGGATCTCTAAAGTTAAAAAATGTGTCTGTTCCAAACATTTCTGTTGTGCCACCACTTCCATTGCTGGTGTCACGTGTTGTTGGGGGTGATGGTGCTATCATTTTGTATGAAGGTGAAATTCGTGATGTATGGATATGTCTGGCTAATGCAGGCACAGTTCCAATTGAGCAGGCACATATTTCATTGTCAGGAAAAAATCAAGATGCTGTGCTTTCATATTCTTTTGAAACTTTAAAGTCTTGCCTCCCCCTAAAGCCTGGAGCAGAAGTGACTTTACCAGTGACCTTGAGAGCTTGGCAGGTTGGTTTGGTGGATCCAGATACCAGTGCTGGGAAGGGTGCCTCCGGAAGCATTATGAGGCATGTTAAAGATGGAACCGGCCCATCATTATTGATACATTATGCTGGTCCACCGCAAACCTCTGGCAATTCTCAAAGTAATGGATCTAATGTGCCCCCTGGTAGGCGCCTTGTTGTTCCTTTGCATATTTGTGTTTTGCCGGGCTTGTATTTTGTTAAGGCTAGGCTACTTTCAATGGAGTTTCCTGCTCATGTTGGTGAGAATCTTCCCAAGTTGGCTGATACAAATAGTAATTCCAACGGAGGACATGTTGAGTCTCAGACAAAAATGGACAGATTGGTGAAAATTGATCCTTTCAGAGGAAGTTGGGGATTGCGATTTCTTGAACTTGAAGTGTCTAACCCCACTGATGTTGTGTTTGAAATTAGTGTTACTGTCAAACTGGAGAACTCTAGCGATGAGGACAATCTTTTTGGTGATCAGGATGCCGCCGAATATGGCTATCCTAAAACGAGAATAGATAGGGATTGCTCCGCCAGGGTTCTAGTGCCTCTTGAGCATTTTAAACTACCAGTTCTTGATGATTCCTTTTTCATGAAGGATATTCAGGCAGACGGTGTTGGTGGAGGCAGGAATAGAATGTTCTCAGAGAAGAACACTAGAGCTGAACTTAATGCCTGTATCAAGAACCTTGTATCTAGGATTAAAGTTAGATGGCATTCAGGACGCAATAGCTATGGAGAGTTGAATATTAAGGATGCCATCCAGGCTGCTCTTCAGACCTCTATTATGGATGTCCTTCTGCCTGATCCATTGACCTTTGGCTTCAGGCTGGTCAGAAATGATTTTGATTCAGAAAAAGAATCCAATGTTGATGATGTGCAGTCTCCTGCATCAAAAGATTCTGTGCTTGCACATGAAATGACGCCAATGGAGGTTCTTGTCCGTAATAATACAAAGGATTTGATCAAAATGAATCTGAACATTACTTGCAGAGATGTAGCTGGGGAAAATTGTGTAGATGGGGCAAAAGCCACCGTTCTATGGACTGGTGTTCTAAATGATATTACTATGGAGATCCCCCCACTTAAAGAGGTTAAACATTCTTTCTGCATGTATTTTCTTGTTCCGGGAGAGTATACCCTTGCAGCTGCAGCAGTGATCAATGATGCAAATGACATTCTCAGGACTCGAGCTAAGACCATTTCGGCTGACGAGCCAATCTTCTGTCGGGGACCACCATATCAAGTTCGTGTTCTTGGGACTGCATGA 3633 0.4478 MEPDVSIESSSRIQVAVLPIGTVPSDMLRDYYSMLLPLHTIPLSAISSFYTEHQKSPFAHQPWDSGFLQFKFVLGGTQPSPWEDFQSHRKTLAVIGICHCPSSPDLDAVVEQFSNCCKSYPSSLVDRCFAFCPDDSQVGVSICAFYSFWSLEDGGKKGGTLRLFPPADRQTLEFHLNTMMQEVAASLLMEFEKWVLQVESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLIDRMGQKDSILEEEVRYRYNSVILNYKKSQDNAQRVSPLSFELEATLKLARFLCRRELAKEVTELLTNAADGAKSLIDASDRLILFVEIARLYGSLGYERKAAFFTRQVAQLYLQQDNQLAAISALQVLALTTKAYHVQSRALAFENSLPNKGIGSSNADSGKKYPQSAVSLFESQWSTLQMVVLREILLSAIRAGDPLAAWSAAARLLRSYYPLITPVGQNGLASALKNSAERLPPGTRCADPALPFIRLHSFPLHPTQMDIVKRNTAREDWWAGSAPSGPFIYTPFSKGEFNNAKKQELIWIVGEPAQVLVELANPCGFDLKVDSIYLSVHSGNFDAFPVSVSLPPNSSKVITLSGIPTSMGVVTVPGCIVHCFGVVTEHLFKDVDNLLLGAAQGLVLSDPFRCCGSLKLKNVSVPNISVVPPLPLLVSRVVGGDGAIILYEGEIRDVWICLANAGTVPIEQAHISLSGKNQDAVLSYSFETLKSCLPLKPGAEVTLPVTLRAWQVGLVDPDTSAGKGASGSIMRHVKDGTGPSLLIHYAGPPQTSGNSQSNGSNVPPGRRLVVPLHICVLPGLYFVKARLLSMEFPAHVGENLPKLADTNSNSNGGHVESQTKMDRLVKIDPFRGSWGLRFLELEVSNPTDVVFEISVTVKLENSSDEDNLFGDQDAAEYGYPKTRIDRDCSARVLVPLEHFKLPVLDDSFFMKDIQADGVGGGRNRMFSEKNTRAELNACIKNLVSRIKVRWHSGRNSYGELNIKDAIQAALQTSIMDVLLPDPLTFGFRLVRNDFDSEKESNVDDVQSPASKDSVLAHEMTPMEVLVRNNTKDLIKMNLNITCRDVAGENCVDGAKATVLWTGVLNDITMEIPPLKEVKHSFCMYFLVPGEYTLAAAAVINDANDILRTRAKTISADEPIFCRGPPYQVRVLGTA 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1428 1210 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1204 IPR013935 -
Lele27g1428 1210 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 9 209 IPR013935 -
Lele27g1428 1210 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 340 753 IPR013935 -
Lele27g1428 1210 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 214 293 IPR013935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1428 Lele-ChrLele27 20524706 20532109 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0659 25 4144343 4151215 Lele27g1428 27 20524706 20532109 hybridization
Lele26g0668 26 4244422 4250786 Lele27g1428 27 20524706 20532109 hybridization