Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1422 ATGTTGTGTAAAAAGGTAATGAGGCCTCGGAAGAAGACGCAGGGAAAGAATCCGGTGTACCTGAACGTCTATGATCTTACGCCGATGAATGGGTATGCATATTGGTTTGGGCTCGGAGTCTATCATTCTGGTGTTCAAGTTCATGGCGTTGAATATGCATTTGGAGCGCATGACCGCTCATCATCCGGGATATTTGAATTAGAGCCTCGCCGCTGTCCTGGTTTCACTTTCAGAAAATCAATTTGTATTGGATCAACAGACTTGAGCCTTAGAGAGGTTCGGGCATATATGGAGTCAATAGCTGATAATTATGCTGGCAACTCATATCATCTCATCACAAAAAACTGCAATCACTTCTGTAACGATGTTTGTGTCAAACTAACCAACAATTCAATCCCTCGCTGGGTAAACCGACTCGCTCGACTCGGCTTACTTTGCAACTGCGTTCTTCCGCCTGAACTGAGTGAGACGAAGATTCGAGCAGTGTCGTCAGATAATGGAGCCTCTGAAGCGGAAAGAAAGAAACTGGAGAGCCATTCTTCTAGGAGATACGAGGCTCCCTCCAAAGCGCAAATATCTTGA 582 0.4536 MLCKKVMRPRKKTQGKNPVYLNVYDLTPMNGYAYWFGLGVYHSGVQVHGVEYAFGAHDRSSSGIFELEPRRCPGFTFRKSICIGSTDLSLREVRAYMESIADNYAGNSYHLITKNCNHFCNDVCVKLTNNSIPRWVNRLARLGLLCNCVLPPELSETKIRAVSSDNGASEAERKKLESHSSRRYEAPSKAQIS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1422 193 PANTHER DESUMOYLATING ISOPEPTIDASE 16 179 IPR008580 GO:0008233
Lele27g1422 193 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Lele27g1422 193 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Lele27g1422 193 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Lele27g1422 193 MobiDBLite consensus disorder prediction 167 184 - -
Lele27g1422 193 MobiDBLite consensus disorder prediction 161 193 - -
Lele27g1422 193 Gene3D PPPDE domains 12 169 IPR042266 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1422 Lele-ChrLele27 20491483 20493720 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g1422 27 20491483 20493720 Lele01g0673 01 3918861 3919203 CCT
Lele27g1422 27 20491483 20493720 Lele02g0655 02 3917937 3918741 CCT
Lele25g0666 25 4181149 4183268 Lele27g1422 27 20491483 20493720 hybridization
Lele26g0674 26 4286203 4288179 Lele27g1422 27 20491483 20493720 hybridization