Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0655 ATGGGGTGCAAAATGGTGATAACGCCACAGAAGAAGAAACTAAGAGGGTTTCCCGTTTACCTTAACGTCTATGATCTCACCCCCATTAATGGCTATGCCTATTGGCTTGGCCTCGGTGTTTACCATTCTGGCGTTCAAGTTCATGGGGTTGAATACGGATTTGGAGTACATGAATACGACACCACCGGCATTTTTCTGGTGGAACCCAGACACTGCGCCGGTTTCACTTTCAGAAAATCTATCCTCATCGGAACCACAGATTTGGACACTAAAGATGTCTCGGCATTTATGGACAGACTGGCTCACCGCTACTCTGGCAACACCTACCACCTTATCACTAAAAACTGCAACCACTTCTGTAATGATGTCTGTCTCAGATTGACCGCAAACTCTATCCCTCGTTGGGTTAATCGACTCGCTCGTCTCGGATACCTCTGCAACTGTGTGCTTCCGTCCGATTTACAGGAAGCAAAGACTGACAATTCTCGAGGACGAGTGGGATCCAAGAAGAATAAAATGAACAAGAAACTGAGACGCCATGCCCACGATTACGAGGCTCCCCAGATTCAAATAGCAGCAGTTTCTGATTATTTAACCATTGAGTTTTAA 609 0.4598 MGCKMVITPQKKKLRGFPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGVHEYDTTGIFLVEPRHCAGFTFRKSILIGTTDLDTKDVSAFMDRLAHRYSGNTYHLITKNCNHFCNDVCLRLTANSIPRWVNRLARLGYLCNCVLPSDLQEAKTDNSRGRVGSKKNKMNKKLRRHAHDYEAPQIQIAAVSDYLTIEF 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0655 202 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Lele02g0655 202 Gene3D PPPDE domains 13 173 IPR042266 -
Lele02g0655 202 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Lele02g0655 202 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Lele02g0655 202 PANTHER DESUMOYLATING ISOPEPTIDASE 17 175 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0655 Lele-ChrLele02 3917937 3918741 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0666 25 4181149 4183268 Lele02g0655 02 3917937 3918741 CCT
Lele26g0674 26 4286203 4288179 Lele02g0655 02 3917937 3918741 CCT
Lele27g1422 27 20491483 20493720 Lele02g0655 02 3917937 3918741 CCT