Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1216 ATGGAATCAGCTGTCAAGAATATTCTAAACACTACGTTAGAATGGATAACATTGGCTTTAGATGCTCCTTCTGCACGAGCTGTAGTTTTTGGAGTGCATATTGGCGGACATTTGTTTGTTGAAGTTGTTCTTCTGGTGGTCATTCTTTTCCTGCTCTCCCAGAAAAGTTACAAGCCTCCTAAACGGCCCTTGAGAGAAAAGGAAATAGATGAGCTATGTGATGAATGGGTTCCAGAACCCCTGATTCCTCCACGTAGTAAAGAGATGCAGTATGAACCCCCAGTGCTGGAGAGGATTATCAGGGAGAAGGGGCATATGTTTGTCTTCCTGCTGATGAACTATATTTCATGTAGTGCTGCTGGGCCACATACCATAGTTAATGGTAGAGAAGTTATTAACTTTACTTCAGCAAACTATCTTGGATTGATAGGTCACAAGAAGCTACATGAGTCATGTTCTTCTGCTTTAGGGAAATATGGTGTTGGTTCTTGTGGTCCTCGTGAATTCTATGGAACAATTGATGTGCACCTAGACTGTGAAGGCAGAATTGCAAAATTTCTGGGAACCCCTGATTCAATTCTGTACTCGTATGGATTTTCCACGATGTTTAGTGCGATTCCTTCTTTTTCTAAAAAAGGAGATATAATTGTTGTTGATGAGGGAGTCCATTGGGGGATACAGAATGGCCTTTATCTTTCAAGAAGCACAGTGGTGTATTTTAAGCACAATGACATGGACTCTTTGAGAGAAACTATGGAGAAAATTACTGCAGAAAATAAGCGGGCCAAGAAAGTGAGGCGGTACATTGTTGTTGAAGCTGTCTACCAGAATTCTGGTCAAATTGCCCCCTTGGATGAGATTATTAGATTGAAAGAGATATACCGCTTTCGTGTTCTGGTGGATGAGAGCAACTCAATTGGTGTGCTTGGGAGTTCAGGAAGAGGCCTCACTGAACATTTTGGAGTTCCGGTTGAGAAATTAGACATCATAACTGCTGCTATGGGACATGCACTGGCCACAGAAGGAGGATTTTGCACAGGAAATGCTAGAGTTATAGATCACCAACGACTGAGTAGCTCTGGCTATGTCTTTTCTGCTTCTCTGCCCCCATATCTTGCTAGCGCTGCAATTTCAGCTATTGACATCCTAGAGGAAAATCCCAGTCTGATAACGAAGCTGAAGGCTAATATTTCTTTGCTATGGAAAGGATTATCAAACATGCAAGGCTTGGTAATAGCAAGCAACCCAGAATCACCGATTGTTTATTTGAGATTGAAAAAGTCAACAGGTTCTATGAAAAATGACCTACATCTGCTCGAAGATATAGCTGAGCGGGTTTTGGAGGAAGATTCTGTGTTTGTCGTTGCTTCCAAAAGATCAACTTTGGACAAATGCCGTTTGCCGGTAGGAATCAGACTTTTTGTTTCAGCAGACCACTCAGAGTCAGATCTCCGTAAGGCAGCTGAATCATTGAAGAGGGTTGCAGCATTAGTCCTGAGTCGCCATGCTTGA 1512 0.4239 MESAVKNILNTTLEWITLALDAPSARAVVFGVHIGGHLFVEVVLLVVILFLLSQKSYKPPKRPLREKEIDELCDEWVPEPLIPPRSKEMQYEPPVLERIIREKGHMFVFLLMNYISCSAAGPHTIVNGREVINFTSANYLGLIGHKKLHESCSSALGKYGVGSCGPREFYGTIDVHLDCEGRIAKFLGTPDSILYSYGFSTMFSAIPSFSKKGDIIVVDEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRETMEKITAENKRAKKVRRYIVVEAVYQNSGQIAPLDEIIRLKEIYRFRVLVDESNSIGVLGSSGRGLTEHFGVPVEKLDIITAAMGHALATEGGFCTGNARVIDHQRLSSSGYVFSASLPPYLASAAISAIDILEENPSLITKLKANISLLWKGLSNMQGLVIASNPESPIVYLRLKKSTGSMKNDLHLLEDIAERVLEEDSVFVVASKRSTLDKCRLPVGIRLFVSADHSESDLRKAAESLKRVAALVLSRHA 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1216 503 FunFam serine palmitoyltransferase 1 isoform X1 145 386 - -
Lele27g1216 503 Coils Coil 245 265 - -
Lele27g1216 503 SUPERFAMILY PLP-dependent transferases 117 495 IPR015424 -
Lele27g1216 503 Gene3D - 145 386 IPR015421 GO:0003824
Lele27g1216 503 Pfam Aminotransferase class I and II 130 491 IPR004839 GO:0009058|GO:0030170
Lele27g1216 503 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 36 494 - -
Lele27g1216 503 Gene3D Aspartate Aminotransferase, domain 1 124 489 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1216 Lele-ChrLele27 19149297 19154401 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1216 1 355 Acyl Lipid Metabolism Gene Families AT4G36480 71.268 0.0 536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0862 25 5528986 5534134 Lele27g1216 27 19149297 19154401 hybridization
Lele26g0875 26 5593252 5605142 Lele27g1216 27 19149297 19154401 hybridization