Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1214 ATGGCCGAGCGGGTAAATATTGCGGCGGTGGCCGCCACCGTCGGATGTGTTTCAACCCTTTTGCTGGTGTTCGTCTTGCGTTGGTGTTATCGCAGAAAGGGAAGAAATTTCGTAGAGCCGGGAAGTCTCACCAGAATGACGAGCCTCCAAGCAGCCACCGATGGGCTTCATTCCCAACATCCACCACAACAACCCAGTGTTCACCATCCGTTTGATCAGGGAACCAAGAACAGGGGCAATTATTTTGTGTTTCATCGTGGGATCTCAGGAAGGCCTTTGTTCAGTTGGGCCGATCATCCCTATCTGGCCGCCGATGCTGTGGAAAACGGTTGGTCTCGATTTGCTTTCACGGCCTACAAGACCCACATGTCGTCTCCTTCAAAAAGATCTGCACTTTTGGGAGTATGTGCAGCAGGTGATCAAGGAAGAGAAACAGAAGCCGAGTTGACCTGGGAAGTGTCTCAGGGATCCGCCGATTTTATGCAGAAGATAAGATTGAATCCTGGGCTTAAAAGAGTTCATCCAAACAATACTTCTATGAGTGTTGCTTCGGTGATCAGAACGGCTCTGCCTCTGCCCGGCCCTCCTCTGGGAAACCATTCATTCCCTCAAGATGCCTATTTTGAAATTACCATTCTGTATTCTCGAGGTGACGATCATGAATCGGTTGGGAAGAATAGGGAAGGCGAGAAGATTAAACTCATTCAGCAAGGGAAATCGGAGGCTTTTGTCCATGTTCCCGGTAGTCATAAAATTAACAATGTTGAAGAAGTCAAACTTGATGGGAAAAGAAGTGAATCTGTAATTTTTTCGTTGGGGTTAACGGGGGGAGGTTCTGTTCCTCTGAGAGTTCCAGGTAGCTCTCCTGGGAGCATCGGCTTCAATTCCAACGGTTCTGTCTTTCTTGATGGAATGAAGCTGGCGTTCGAGTCGGATAAGGCAGAATGGGTGGGAAGTGATAAGGTAATAGGGTGTGGGTTTGATCCGAGGCAGAAGAAAGTTTTGTTTACGTTGGACTCAGAGTTGGTGCATGTAATTCATTGTCAGTCAGAAGAATTTGGGACTCCGTTATATCCAACATTGGCTGCAAATATCGACATCCTTGTATTAGTAAATTTTGGACAAAGGGCGTTCAAGTTTGCACCTGCTAATGCACAAAGAACACCAAATCCATGTTTTATAGCGCCTCTAGTAAATTCCCCTGCCAATACCCTGAGCTACGACGACAGCAAGGAGCTGTTTTCAATGGGAAGAATTGATTCTCAGTGGCTGAATCGATCTGCAACCAAAGGCAGCCACAATAATGGTGGGGCCAATAATAATAATAATCGAGTGGTAGATTTTGATGAGGAGTCCGAGGCTGATCTATTTGAAATTGTCTTGGAGGGTTCTGAAAAACCTCCCAACTCAACCACGTCGTAG 1422 0.4669 MAERVNIAAVAATVGCVSTLLLVFVLRWCYRRKGRNFVEPGSLTRMTSLQAATDGLHSQHPPQQPSVHHPFDQGTKNRGNYFVFHRGISGRPLFSWADHPYLAADAVENGWSRFAFTAYKTHMSSPSKRSALLGVCAAGDQGRETEAELTWEVSQGSADFMQKIRLNPGLKRVHPNNTSMSVASVIRTALPLPGPPLGNHSFPQDAYFEITILYSRGDDHESVGKNREGEKIKLIQQGKSEAFVHVPGSHKINNVEEVKLDGKRSESVIFSLGLTGGGSVPLRVPGSSPGSIGFNSNGSVFLDGMKLAFESDKAEWVGSDKVIGCGFDPRQKKVLFTLDSELVHVIHCQSEEFGTPLYPTLAANIDILVLVNFGQRAFKFAPANAQRTPNPCFIAPLVNSPANTLSYDDSKELFSMGRIDSQWLNRSATKGSHNNGGANNNNNRVVDFDEESEADLFEIVLEGSEKPPNSTTS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1214 473 SUPERFAMILY Concanavalin A-like lectins/glucanases 283 380 IPR013320 -
Lele27g1214 473 PANTHER IMMUNOGLOBULIN SUPERFAMILY MEMBER 5 90 461 IPR043364 GO:0098609
Lele27g1214 473 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Lele27g1214 473 MobiDBLite consensus disorder prediction 53 72 - -
Lele27g1214 473 Gene3D - 141 388 IPR043136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1214 Lele-ChrLele27 19139578 19141464 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0864 25 5542026 5543915 Lele27g1214 27 19139578 19141464 hybridization
Lele26g0878 26 5614396 5616289 Lele27g1214 27 19139578 19141464 hybridization