Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0864 ATGGCCGAGCGGGTAAATATTGCGGCGGTGGCCGCCACCGTCGGATGTGTTTCAACCCTTTTGCTGGTGCTCGTTTTGCGTTGGTGTTATCGCAGAAAGGGAAGAAATTTCGTAGAGCCGGGAAGTCTCACCAGAATGACTAGCCTCCAAGCAACCACCGATAGGCTTCATGCCCAACATCCACCACAGCAACCCACTGTTCACCATCCGTTTGATCAGGGAACCAAGAACAGGGGCAATTATTTTGTGTTTCATCGTGGGATCTCCGGAAGGCCTTTGTTCAATTGGGCCGATCATCCCTATCTGGCCGCCGATGCTGTGGAAAACGGTTGGTCTCGATTTGCTTTCACGGCCTACAAGACCCACATGTCGTCTCCTTCAAAAAGATCGGCATTTTTGGGAGTATGTGCAGCAGGGGATCAAGGAAGAGAAACAGAAGCCGAGTTGACCTGGGAAGTGTCTCAGGGATCCTCCGATTTTATGCAGAAGATAAGATTGAATCCTGGGCATAAAAGGGTTCATCCAAACAATTCTTCTTTGAGTGTGGCTTCGGTGATCAGAACGGCTCTGCCTCTGCCCGGCCCTCCTCTGGGAAACCGTTCATTCCCTCAAGATGCCTATTTTGAAATTACCATTCTGTATTCTCGAGGTGACGATTATGAATCGGTTGGGAAGAATAGAGAAGGAGAGAAGATTAAACTCATTCAGCAAGGGAGATCGGAGGCTTTTGTCCATGTTCCCAGTAGTCATAAAATTAACAATGTTGAAGAAGTCAAACTTGATGGGAAAAAAGGTGAATCTGTCATTTTTTCGTTGGGGTTAACGGCGGGAGGTTCTGTTCCTTTGAGAGTTCCAGGTAGCTCTCCTGGGAGCATTGGCTTCAATTCCAACGGTTCTGTCTTTCTTGATGGAATGAAGCTCGTGTTCGAGTCGGATAAGGCAGAATGGGTAGGAAGTGATAAGGTAATAGGGTGTGGGTTTGATCCGAGGCAGAAGAAAGTTTTGTTTACGTTGGACTCAGAGTTGGTGCATGTAATTCATTGTCAGTCAGAGGAATTTGGGACTCCGTTATATCCAACATTGGCTGCAAATATCGACATCCTAGTATTAGTAAATTTTGGACAAAGTGCGTTCAAGTATGCACCTGCGAATGCACAAAGAACGCCAAATCCATGTTTTATAGCGCCTCTAGTAAATTCCCCTGCCAATACCCTGAGCTACGACGACAGCAAGGAGCTTTTTTCAATGGGAAGAATTGATTCTCAGTGGCTGAACCGATCTGCAACCAAAGGCAGCCACAATAATGGTGGGGCCAATAATAATAATAATAATCGAGTGGTAGATTTTGATGAGGAGTCCGAGGCTGATCTATTTGAAATTGTCTTGGATGGTTCTGAAAAACCTCCCAACTCAACCACGTCGTAG 1425 0.4639 MAERVNIAAVAATVGCVSTLLLVLVLRWCYRRKGRNFVEPGSLTRMTSLQATTDRLHAQHPPQQPTVHHPFDQGTKNRGNYFVFHRGISGRPLFNWADHPYLAADAVENGWSRFAFTAYKTHMSSPSKRSAFLGVCAAGDQGRETEAELTWEVSQGSSDFMQKIRLNPGHKRVHPNNSSLSVASVIRTALPLPGPPLGNRSFPQDAYFEITILYSRGDDYESVGKNREGEKIKLIQQGRSEAFVHVPSSHKINNVEEVKLDGKKGESVIFSLGLTAGGSVPLRVPGSSPGSIGFNSNGSVFLDGMKLVFESDKAEWVGSDKVIGCGFDPRQKKVLFTLDSELVHVIHCQSEEFGTPLYPTLAANIDILVLVNFGQSAFKYAPANAQRTPNPCFIAPLVNSPANTLSYDDSKELFSMGRIDSQWLNRSATKGSHNNGGANNNNNNRVVDFDEESEADLFEIVLDGSEKPPNSTTS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0864 474 Gene3D - 139 388 IPR043136 -
Lele25g0864 474 SUPERFAMILY Concanavalin A-like lectins/glucanases 281 380 IPR013320 -
Lele25g0864 474 PANTHER IMMUNOGLOBULIN SUPERFAMILY MEMBER 5 90 462 IPR043364 GO:0098609
Lele25g0864 474 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0864 Lele-ChrLele25 5542026 5543915 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0864 25 5542026 5543915 Lele27g1214 27 19139578 19141464 hybridization
Lele25g0864 25 5542026 5543915 Lele28g0858 28 5528454 5530345 hybridization