Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0878 ATGACCGAGCGGGTAAATATTGCGGCGGTGGCCGCCACTGTCGGATGTGTTTCAACCCTTTTGTTGGTGCTCGTTTTGCGTTGGTGTTATCGCAGAAAGGGAAGAAATTTCGTAGAGCCGGGAAGTCTCACCAGAATGACGAGCCTCCAAGCGGCCACCGATAGGCTTCATCCCCGACATCCACCACAACAACCCAGTGTTTATCATCCGTTTGATCAGGGAACCAAGAACAGGGGCAATTATTTTGTGTTTCATCGTGGGATCTCCGGAAGGCCTCTGTTCAGTTGGTCCGATCATCCCTGTCTGGCATCCGACGCGGTGGAAAACGGATGGTCTCGATTCGCTTTCACGGCCTACAAGACCCACATGTCGTCTCCTTCACAAAAATCGGCACTTTTGGGAGTATGTGCAGCAGGTGATCAAGGGAGAGAAACAGAGGCCGAGTTGACCTGGGAAGTGAGTCAGGGATCCGCCGATTTTATGCAGAAGATAAGATTGAATCCTGGGCTTAAAAGGCTTCATCCAAAAAATTCTTCTATGAGTGTTGCTTCGTTGATCAGGACGGCTCTGCCTCTTCCTGGCCCTCCTCTGGGAAACCATTCATTCCCTCAAGAGGCCTATTTTGAAATTACCATTCTGTATTCTCGAGGTGAAGATTATGAATCGGTTGGGAAGAATAGAGAAAGCGAGAAGATTAAACTGATTCAGGAAGGGAAATCGGAGGCTTTTGTCCATGTTCCCAGTAGTCATAAAATTAACAATGTTGAAGAAGTCAAACTTGATGGGAAAAAAAGCGAATCTGTGATTTTTTCTTTGGGTTTAACGGCGGGTGGCTCTGTTCCTTTGAGAGTTCCAGGTAGCTATCCTGGGAGCATCGGCTTCAATTCCAACGGTGCTGTCCTTCTTGATGGAATGAAGCTGGTGTTCGAGTCGGATAGGGCAGAATGGGTAGGAAGTGATAAGGTAATAGGGTGTGGGTTTGATCCGAGGCAGAAGAAAGTTTTGTTCACGTTGGACTCAGAGTTGGTGCATGTAATTCATTGTCAATCAGAGGAATTTGGGACTCCGTTATATCCAACATTGGCTGCAAATATCGACATCCTAGTATCAGTAAATTTTGGACAAAGTGCATTCAAGTATGCACCTGCGAATGCACAAAGAACACCAAATCCATGCTTTATAGCGCCTCTTGTAAATTCCCCTGCCAATACGCTGAGCTACGACGACAGCAAGGAGCTGTTTTCAATGGGAAGAATTGATTCTCAGTGGCTGAATCGATCTGCAACCAAAGGCAGCCACAATAATGGTGGGGCCAATAATAACAATCGAGTCGTAGATTTTGATGAGGAGTCTGAGGCTGATCTATTTGAAATCGTCCTGGATGGTTCTGGAAAACCTCCCAACTCAACCACGTCGTAG 1419 0.4679 MTERVNIAAVAATVGCVSTLLLVLVLRWCYRRKGRNFVEPGSLTRMTSLQAATDRLHPRHPPQQPSVYHPFDQGTKNRGNYFVFHRGISGRPLFSWSDHPCLASDAVENGWSRFAFTAYKTHMSSPSQKSALLGVCAAGDQGRETEAELTWEVSQGSADFMQKIRLNPGLKRLHPKNSSMSVASLIRTALPLPGPPLGNHSFPQEAYFEITILYSRGEDYESVGKNRESEKIKLIQEGKSEAFVHVPSSHKINNVEEVKLDGKKSESVIFSLGLTAGGSVPLRVPGSYPGSIGFNSNGAVLLDGMKLVFESDRAEWVGSDKVIGCGFDPRQKKVLFTLDSELVHVIHCQSEEFGTPLYPTLAANIDILVSVNFGQSAFKYAPANAQRTPNPCFIAPLVNSPANTLSYDDSKELFSMGRIDSQWLNRSATKGSHNNGGANNNNRVVDFDEESEADLFEIVLDGSGKPPNSTTS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0878 472 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Lele26g0878 472 CDD SPRY_RanBP_like 257 374 IPR044736 -
Lele26g0878 472 PANTHER IMMUNOGLOBULIN SUPERFAMILY MEMBER 5 90 460 IPR043364 GO:0098609
Lele26g0878 472 SUPERFAMILY Concanavalin A-like lectins/glucanases 283 380 IPR013320 -
Lele26g0878 472 Gene3D - 172 388 IPR043136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0878 Lele-ChrLele26 5614396 5616289 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0878 26 5614396 5616289 Lele27g1214 27 19139578 19141464 hybridization
Lele26g0878 26 5614396 5616289 Lele28g0858 28 5528454 5530345 hybridization