Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0771 ATGGCGCCAACATTCCTGTCTCTGTGCTTGCTCCTATGCTTTGGCGTCCGCCTGTCCTTTTCTGGACAATCTAGCTCCATGGAATCAGTCCCTGATCTTCAGAAGTCTATGTACAAGGTAGTTGATGGATATCCTTGTGTGCGGCTACTAAGTCTTTCTGGACCTATCGGTTGCTCCAATCCTGGACGAGACAAGGTTGTTGCCCCTATAGTGACATTTAAAAATGCTAATCAGCTGTCAAAGTCATCTGCTATATTGGTGTCATTGGATGAGTTTGAAAGTCTCTTAACAAGAATATCTGGTGATTCAAGCTTTGCAAGTAAGGTTGCTGGTGTGCTTGTTGAGTCAGGAGCTGGAGTGCAGAATAATTTGAAGGGATTCTCTCCAGAACAAAAGTTTCCACAAGCTGAATTTGCTCCTTACCAAAACATTGGATATCAATGGAATCCAACTGGTTCTGGTATCATGTGGAAATCCTACAATTTTCCCATTTTCCTACTCTCAGATAGCAGCACAGAGACTATTCATGAGGTTGCAACCAAGAATGAGAACAGGAAAGGTTATACAGCTAATGTGGCTGAGTTTGATCTAGTGATGCAGGTAACGAAATCTGGAAATCATGATTCAGAGTCTTGTTTGAAAGAAGCTACTTGCCTCCCTCTAGGTGGATACAGTGTCTGGTCATCACTTCCACCTATCAACATTTCATCCTTTGATCATCCTAAGCCAATAATATTGACAATGGCATCAATGGATTCTGCTTCATTTTTTCGGGACAAGAACCTAGGGGCAGAATCTCCTATTTCTGGCTTGATTGCGTTGCTGGCAGCGGTTGATGCTCTCTCTCATGTGAATGGTCTTGGTGACCTTACTAAACAGCTTGTTTTTGTAGTTTTTACTGGCGAGGCATGGGGTTACCTTGGAAGTCGAAGATTTTTGCAAGAGCTTGACATGCATTCTGATGCTGTCCATGGGCTTAATAACTCACAAATTGAAATGGTTATTGAAATTGGTTCTGTTGGAAAGGGTTTCAATGAAGGTGCTCATAGATTTTTTGCTCATACATCAGGGGTATCCTCTGCTACAAATGAGACATTGTCTGCCTTGAAGCATGCGCAAGAGTCATTGCTATCTGAGAACATTAAGATCACACCTCCCAGTGACTCAAATCCTGGCATACCTCCATCATCCTTGATGGCATTTTTGAAAAAGAATCCTGCAAACTCCGGGATTGTCTTGCAAGATTTTGATGCTGTCTTTACCAACAAATTCTACCATAGTCACCTTGATGATTTATCAAACATAAACTCATCAGCTATAGTTGCAGCTGCTTCTCTTGTTGCCCGAACTCTGTACATTCTTGCTAGTGGAAAGGAAGATGTCAGAGATTCAGCTTTAACTGCAATAAATGTAAATGAGTCACTTGTTGAAGAACTTGTGGGTTGCTTATTGACCTGTGATCCTGGCCTTTCTTGTGAATTAGTGAAGAGCTATATTTCACCTTCATCAGCCTGTCATAACTATTATGTTGGTGTTATCCTGGATGAACCTTCATCTACACCATATCCAGGATACATTAACGATGTTCCCAGGTTCATCTGGAATTTTTTATCTGACAAAACCTCTATTTCAAAGGAAAATGGTAGAACCAGTTGTCAAGAAGATTGCAAAAGTAGGGATGAAGTTTGCATTAAAGCAGAGACTGATGGGAAGGGGGTTTGTGTTACCTCTAGAACCAGGTACGTCCCAGCATATTCAACACGATTAAAATATGAATCAGGAGTATGGAATGTTTTGCCCCCTAATTCATCTGACAGCATGGGAGCTGTGGACCCGGTCTGGACAGAAAGCAATTGGAACACAATTGGGATTCAAGTGTACACTATCCAAGATGCGGCTTATGATCGTCTTGTTCTGGTTGGGGGTATCACCATTACAATCTTAGCATACGTTGCAATAGTAATTATAAGAGCTCTTATCACCAAAACCATGAAGAGGGATTGA 2004 0.4162 MAPTFLSLCLLLCFGVRLSFSGQSSSMESVPDLQKSMYKVVDGYPCVRLLSLSGPIGCSNPGRDKVVAPIVTFKNANQLSKSSAILVSLDEFESLLTRISGDSSFASKVAGVLVESGAGVQNNLKGFSPEQKFPQAEFAPYQNIGYQWNPTGSGIMWKSYNFPIFLLSDSSTETIHEVATKNENRKGYTANVAEFDLVMQVTKSGNHDSESCLKEATCLPLGGYSVWSSLPPINISSFDHPKPIILTMASMDSASFFRDKNLGAESPISGLIALLAAVDALSHVNGLGDLTKQLVFVVFTGEAWGYLGSRRFLQELDMHSDAVHGLNNSQIEMVIEIGSVGKGFNEGAHRFFAHTSGVSSATNETLSALKHAQESLLSENIKITPPSDSNPGIPPSSLMAFLKKNPANSGIVLQDFDAVFTNKFYHSHLDDLSNINSSAIVAAASLVARTLYILASGKEDVRDSALTAINVNESLVEELVGCLLTCDPGLSCELVKSYISPSSACHNYYVGVILDEPSSTPYPGYINDVPRFIWNFLSDKTSISKENGRTSCQEDCKSRDEVCIKAETDGKGVCVTSRTRYVPAYSTRLKYESGVWNVLPPNSSDSMGAVDPVWTESNWNTIGIQVYTIQDAAYDRLVLVGGITITILAYVAIVIIRALITKTMKRD 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0771 667 FunFam Nicastrin 172 467 - -
Lele27g0771 667 CDD M28_Nicastrin 41 620 - -
Lele27g0771 667 SUPERFAMILY Zn-dependent exopeptidases 215 445 - -
Lele27g0771 667 Gene3D Zn peptidases 172 469 - -
Lele27g0771 667 Pfam Nicastrin small lobe 45 200 IPR041084 -
Lele27g0771 667 Pfam Nicastrin 243 452 - -
Lele27g0771 667 PANTHER NICASTRIN 9 666 IPR008710 GO:0016020|GO:0016485
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0771 Lele-ChrLele27 15758644 15774864 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1317 25 9002248 9014001 Lele27g0771 27 15758644 15774864 hybridization
Lele26g1325 26 8946928 8957648 Lele27g0771 27 15758644 15774864 hybridization