Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1325 ATGTACAAGGTAGTTGATGGATATCCTTGTGTGCGGCTACTAAGTCTTTCTGGACCTATCGGTTGTTCCAATCCTGGACGAGACAAGGTTGTTGCCCCAATAGTGACATTCAAAAATGCTAATCAGCTGTCAAAGTCATCTGCTATATTGGTGTCATCGGATGAGTTTGAAAGTCTCTTAACAAGAATATCTGGTGATTCAAGCTTTGCAAGTAAGGTTGCTGGTGTGCTTGTTGAGTCAGGAGCTGGAGTGCTGAACAAGTTGAAGGGATTCTCTCCAGAACTAAAGTTTCCTCAAGTTGAATTTGCTCCTTACGATAACACTGGATATCAATGGAATCCAACTGGCTCCGGTATCATGTGGAGATCCTACAATTTTCCTGTTTTTCTACTCTCAGATAGCAGCACAGAGACTCTTCATGAGGTTGCAACCAAGAATGAGAATAACATGAAAGGTTATACAGCTAATGTGGCTGAGTTTGATCTGGTGATGCAGGTAACGAAATCTGGAAATCGTGGTTCAGAGTCTTGTTTGGAAGAAGCTACTTGCCTCCCTTTAGGTGGATACAGTGTCTGGTCATCACTTCCACCAATCAACATTTCATCCTTTGATCATCCTAAGCCTATAATATTGACAATGGCATCAATGGATTCTGCTTCATTTTTTCGGGACAAGAACCTAGGGGCAGAGTCTCCTATTTCTGGCTTGATTGCGTTGCTGGCAGCAGTTGATGCTCTCTCTCATGTGAATGGTCTTGGTGACCTTACTAAACAGCTTGTTTTTGTAGTTTTTACTGGCGAGGCATGGGGTTACCTTGGAAGTCGAAGATTTTTGCATGAGCTTGACATGCATTCAGATGCTGTCCATGGGCTTAATAACTCACAAATTGAAATGGTTATTGAAATTGGTTCTGTTGGAAAGGGTTTCAATGAAGGTGCTCATAGATTTTTTCCTCATACATCAGGGGTATCTTCTGCTACAAATGAGACATTGTCGGCCTTGAGGCATGCGCAAGAGTCATTGCTATCTGAGAACATTAAGATCACATCTCCAAGTGACTCAAATCCGGGGATACCTCCATCATCCTTGATGGCATTTTTGAAAAAGAATCCTGGAATCTCTGGGATTGTCTTGGAAGATTTTGATGCTGTCTTTACCAACAAGTTCTACCATAGTCATCTTGATGATTCATCAAACGTAAACTCATCAGCTATAGTTGCAGCTGCTTCTCTTGTTGCCCGAACTCTGTACATTCTTGCTAGTGAAAAGGAAAATGTGCAAGATTCAGCTTTACCTGCTATAAATGTAAATGCGTCACTTGTTGAAGAACTTATCGGTTGCTTATTGACCTGTGATCCTGGCCTTTCTTGTGAATTAGTGAAGAGCTATATTTCACCTTCATCAATCTGTCCTAGCCATTATGTTGGTGTTATCATGGATGAACCTTCATCTACACCATACCCAGGATACATTAACGATGTTCCCAGGTTTATCTGGAATTTTTTATCTGACAAAACCTCTATTTCAAAGGAAAATGGTAGAACCAGTTGTCAAGAAGATTGCAAAAGTAGGGATGAAGTTTGCATTAAAGCAGAGACTGACGGGAAGGGGGTTTGTGTTACCTCTACAACCAGGTATGTACCAGCATATTCAACGCGATTAAAATATGAATCAGGAGTATGGAATGTTTTGCCCCCCAATGCATCTGATGACATGGGAGCTGTGGACCCGGTCTGGACAGAAAGCAATTGGAACACAATTGGGATTCAAGTGTACACGATCCAAGATGCGGCTTATGATCGTCTTGTTCTGTTTGGGGGTATCACCATTACAATCTTAGCATACGTTGCAATAGTAATTATAAGAGCTTTTATCACCAAAACCATGAAGAGGGATTGA 1899 0.4144 MYKVVDGYPCVRLLSLSGPIGCSNPGRDKVVAPIVTFKNANQLSKSSAILVSSDEFESLLTRISGDSSFASKVAGVLVESGAGVLNKLKGFSPELKFPQVEFAPYDNTGYQWNPTGSGIMWRSYNFPVFLLSDSSTETLHEVATKNENNMKGYTANVAEFDLVMQVTKSGNRGSESCLEEATCLPLGGYSVWSSLPPINISSFDHPKPIILTMASMDSASFFRDKNLGAESPISGLIALLAAVDALSHVNGLGDLTKQLVFVVFTGEAWGYLGSRRFLHELDMHSDAVHGLNNSQIEMVIEIGSVGKGFNEGAHRFFPHTSGVSSATNETLSALRHAQESLLSENIKITSPSDSNPGIPPSSLMAFLKKNPGISGIVLEDFDAVFTNKFYHSHLDDSSNVNSSAIVAAASLVARTLYILASEKENVQDSALPAINVNASLVEELIGCLLTCDPGLSCELVKSYISPSSICPSHYVGVIMDEPSSTPYPGYINDVPRFIWNFLSDKTSISKENGRTSCQEDCKSRDEVCIKAETDGKGVCVTSTTRYVPAYSTRLKYESGVWNVLPPNASDDMGAVDPVWTESNWNTIGIQVYTIQDAAYDRLVLFGGITITILAYVAIVIIRAFITKTMKRD 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1325 632 CDD M28_Nicastrin 5 585 - -
Lele26g1325 632 Gene3D Zn peptidases 132 435 - -
Lele26g1325 632 Pfam Nicastrin small lobe 9 165 IPR041084 -
Lele26g1325 632 SUPERFAMILY Zn-dependent exopeptidases 182 416 - -
Lele26g1325 632 Pfam Nicastrin 208 417 - -
Lele26g1325 632 PANTHER NICASTRIN 1 631 IPR008710 GO:0016020|GO:0016485
Lele26g1325 632 FunFam Nicastrin 136 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1325 Lele-ChrLele26 8946928 8957648 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1325 26 8946928 8957648 Lele27g0771 27 15758644 15774864 hybridization
Lele26g1325 26 8946928 8957648 Lele28g1318 28 8938727 8950880 hybridization